Stenotrophomonas pavanii: STNY_R14350
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Entry
STNY_R14350 CDS
T07567
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STNY_R14350 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spaq03400
]
STNY_R14350 (nth)
Enzymes [BR:
spaq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
STNY_R14350 (nth)
DNA repair and recombination proteins [BR:
spaq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STNY_R14350 (nth)
Prokaryotic type
STNY_R14350 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BCX43251
LinkDB
All DBs
Position
complement(1571551..1572243)
Genome browser
AA seq
230 aa
AA seq
DB search
MATVKKTARAPARRGGRMPRADVVEMFTRLRELNPHPKTELEYSSPFELLVAVALSAQAT
DVGVNKATRRLFPVANTPATILALGEDGLKPYISTIGLFNAKAKNVIATCAILLQKYGGE
VPRDREALEALPGVGRKTANVVLNTAFGEPVMAVDTHIFRVSNRTGLAPGKNVREVEDTL
VKVIPAEFLLDAHHWLILHGRYVCKARKPDCPGCVIADLCRFKEKTPAEA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtgaagaagacggcccgcgcaccggcgcggcgcggcggccgcatgccgcgc
gccgacgtggtggaaatgttcacccgcctgcgcgagctcaacccgcaccccaaaaccgaa
ctggagtacagctcgccgttcgagctgctggtggccgtggcgctgtcggcgcaggcgacc
gacgtcggcgtcaacaaggccacgcgtcgtctgttcccggtcgccaacacgccggcgacg
atcctggcgctcggcgaggatggcctgaagccgtacatctccaccatcggcttgttcaac
gccaaggcgaagaacgtgatcgccacctgcgccatcctgctgcagaagtacggcggcgaa
gtgccgcgcgaccgcgaagcgctggaagcgctgcccggtgtcggccgcaagaccgccaac
gtggtcctcaacaccgcgttcggcgagccggtgatggcggtggatacgcatatcttccgc
gtctccaaccgtaccggcctggctccgggcaagaatgtgcgcgaagtggaggacacgctg
gtgaaggtgatccccgccgagttcctgctcgacgcgcatcactggctgatcctgcacggc
cgttatgtgtgcaaggcgcgcaagccggattgcccgggctgcgtgatcgccgacctgtgc
cggttcaaggaaaagacgccggccgaagcgtga
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