Stenotrophomonas pavanii: STNY_R17610
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Entry
STNY_R17610 CDS
T07567
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq01501
beta-Lactam resistance
spaq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
STNY_R17610
01503 Cationic antimicrobial peptide (CAMP) resistance
STNY_R17610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spaq03036
]
STNY_R17610
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spaq02000
]
STNY_R17610
01504 Antimicrobial resistance genes [BR:
spaq01504
]
STNY_R17610
Chromosome and associated proteins [BR:
spaq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
STNY_R17610
Transporters [BR:
spaq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
STNY_R17610
Antimicrobial resistance genes [BR:
spaq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
STNY_R17610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
PTS_EIIA_1
DNA_pol_B_3
OEP
Motif
Other DBs
NCBI-ProteinID:
BCX43563
LinkDB
All DBs
Position
1899961..1901106
Genome browser
AA seq
381 aa
AA seq
DB search
MSHPTLLSGRRSGICAAALLISTSLLLGGCAAGPNSEAKAAETKEEKKVDAVPVEVAVAS
HRAVAASYTGTAALEPRAESQVVAKTSGVALAVLVEEGQRVTAGQPLVRLDPDRARLAVA
QSEAQMRKLENNYQRAQKLVGQQMVSAADVDQLRFDLENVRAQYRLATLELSYTTVVAPI
SGVIASRSIKTGNFVQINTPIFRIVDNSRLEATLNVPERELATLRAGQPVTLAADALPGQ
SFTGTVDRIAPVVDSGSGTFRVVSAFDGAAHALQPGMFGRIRIDYDQRADALVVPRLALL
DDGEPAVFRVREGKVARVPVKLGYAEGPWVEIRDGLAAGDQVVTAGKVALRDGTAVQVIA
DPKAKTVATAAKPAAKAGSTQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacccaaccctcctgtccggccgtcgcagcggaatctgcgctgccgcactgctg
atctccacctccctgctgctgggcggttgcgccgcagggcccaattccgaagccaaggcc
gccgagaccaaggaggaaaagaaggtcgatgcggtcccggtcgaggtggcggtggccagc
catcgcgcggtcgcggccagttacaccggtaccgccgcactggagccacgcgccgaatcg
caggtggtcgccaagacctccggcgtggcactggcggtgctggtcgaggaaggtcagcgg
gtcaccgccggccagccgctggtgcggctggacccggaccgcgcgcgcctggcggtggca
cagagcgaagcgcagatgcgcaagctggaaaacaactaccagcgcgcacagaagctggtc
ggccagcagatggtcagcgccgccgatgtcgaccagctgcgtttcgatctggaaaacgtc
cgcgcgcagtaccgcctggcgacgctggaactgtcctacaccaccgtggtcgcaccgatt
tccggcgtgatcgcctcgcgctcgatcaagaccggcaacttcgtgcagatcaatacgccg
atcttccgcatcgtcgacaactcgcgactggaggcgacgctcaacgtgcccgaacgcgag
ctggccaccctgcgcgccggccagccggtgaccctggcggccgacgcgctgccggggcag
agcttcaccggcaccgttgaccgcattgcgccggtggtggactcgggcagtggcacgttt
cgcgtggtcagcgccttcgacggcgcagcacacgcgctgcagcccggcatgttcgggcgc
atccgcatcgattacgaccagcgtgccgatgcgctggtggtgccgcgcctggcgttgctc
gacgacggtgagccggcggtgttccgcgtgcgcgaaggcaaggtcgcacgcgttccggtc
aaactgggttacgccgagggcccgtgggtggagatccgtgatggcctggcggccggtgat
caggtggtcaccgccggcaaggtcgccctgcgcgacggcaccgcggtgcaggtgattgcc
gacccgaaggcgaagacggtcgcaacggccgccaagccggcagccaaggccgggagcacg
caatga
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