Stenotrophomonas pavanii: STNY_R19010
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Entry
STNY_R19010 CDS
T07567
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18146
multidrug efflux pump
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq01501
beta-Lactam resistance
Module
spaq_M00649
Multidrug resistance, efflux pump AdeABC
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
STNY_R19010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spaq02000
]
STNY_R19010
01504 Antimicrobial resistance genes [BR:
spaq01504
]
STNY_R19010
Transporters [BR:
spaq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
STNY_R19010
Antimicrobial resistance genes [BR:
spaq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AdeABC [MD:
M00649
]
STNY_R19010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BCX43702
LinkDB
All DBs
Position
2060268..2063417
Genome browser
AA seq
1049 aa
AA seq
DB search
MARFFIDRPVFAWVLAIFIILAGVLAIPRLAVERYPAVAPPSVSIYASYPGASPQTLNDA
VVGLIERELSSVKHLLYFESSVDTSGEASITATFKPGTDPELAQVDVQNRIKAIEPRLPR
SVRQNGLFVEAADSGFLMLVGLRSPDASVSEAALGDFMARNIIEELRRIDGVGRVQLFGA
EQAMRVWLDPARLTGYGLTITDVATAIEQQNLEISPGRIGDSPGVPGQRITVPLSADGQL
STPEQFAAIVLRAGADGSRVLLGDVARVELGAQSYAWGTREDGHPATAAGVQLRPGANAV
RTAAAVRERMAELAPLLPRGVESSIPFDTAPFVKISIQKVVQTLLEAMLLVFAVMYLFLQ
NWRYTLIPALVAPIALLGTFAVMLALGFSINVLTMFGMVLAIGIIVDDAIVVVEGVERIM
AEEGLPPREATLKAMRELTGAVIGITLVLTAVFIPMALASGSVGAIYRQFTVAMAVSILF
SALLALSLTPALCATLLRPTTHGHHGRSGLFGAFNRGFERMTGRYQRGVASVLQRSGRVM
GVFAALVVALLLGLHWLPGAFLPEEDQGYFMTSIQLPAEATAERTLAVVEAYERHVASRP
GIGSNQAILGYSFSGSGPSAALTYTMLKDWGERAGATAAGEVEAAQKAMAAVAEGEVMSV
MPPAIDSLGRSSGFSLALQARTGQSQAELRAALQQLLKLAEASPLLSEVHADGLPAGTSV
RLDIDRAKAEAMGVGFEHISSTLSAAMGSQYVNDFPNKGRLQQVILQADAPHRMELEDVL
KLYVRNSEGGMVALSELVTPHWTEAPLQLQRYLGFPALNLSGAPASGVSTGQAMAEMERL
AQKLPSGFALQWTSQSLQERESGQQAPWLLLLSMLVVFLVLAALYESWSIPLAVMLVVPL
GLLGAVAAVLLRGMPNDVFFKVGMITVIGLSAKNAILIVEFARQLQQQGRGLVEAALEAA
RLRLRPIVMTSLAFALGVVPLMLAQGASKETQQAIGTGVFGGMVSATVLAVFFVPVFYVV
VQRARQWIAQRLRRRRPMPEGTVDGTQQR
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttttttcatcgatcgcccggtgttcgcctgggtgctggcgatcttcatcatc
ctggccggcgtactggcgatcccgcggctggcggtggagcgctatccggccgttgcgccg
cccagcgtcagcatctacgccagctatccgggcgccagcccgcagacgctgaacgacgct
gtggtcggcctgatcgagcgcgagctgtccagcgtcaagcatctgctgtacttcgaatcg
tcggtggatacctccggtgaagcgtcgatcacggccaccttcaagccggggaccgacccg
gagctggcgcaggtggacgtgcagaaccggatcaaggcgatcgagccacgcctgccacgc
agcgtgcgccagaacggcctgttcgtggaggccgccgattccggcttcctcatgctggtc
ggcctgcgctcgccggatgccagcgtcagcgaggcagcgctcggcgacttcatggcccgc
aacatcatcgaggagctgcgccgcatcgatggcgtcggccgcgtgcagctgttcggcgcc
gaacaggcgatgcgcgtgtggctggacccggcccggttgaccggttacggcctgaccatc
actgacgtggccacggccatcgagcagcagaacctggagatctcacccgggcgcatcggc
gattcgccgggtgtgccgggccagcgcatcaccgtgccgttgagcgccgatggccagctg
tccacgccggagcagttcgccgccatcgtgctgcgcgccggggccgacggctcgcgggtg
ctgctgggcgatgtcgcccgcgtcgagctgggcgcgcagagctacgcctggggtacccgc
gaggacggtcacccggccaccgccgccggcgtgcagctgcgcccgggtgcgaacgcggtg
cgcacggccgcggcggtgcgcgagcggatggccgagctggcaccgctgctgccgcgcggg
gtggagtcgagcattccgttcgataccgcacccttcgtgaagatctcgatccagaaggtg
gtgcagaccctgctggaggcgatgctgctggtgttcgcggtgatgtacctgttcctgcag
aactggcgctacacgctgattccagcgctggtggcaccgatcgcgctgctggggaccttc
gcggtgatgctggccctgggcttctcgatcaacgtgctgaccatgttcggcatggtgctg
gcgatcggcatcatcgtcgatgatgcgatcgtcgtggtcgaaggcgtggaacggatcatg
gccgaggagggcctgcccccgcgcgaggccaccctcaaggcgatgcgcgagctgaccggt
gcggtgatcggcatcaccctggtgctgaccgcggtgttcatcccgatggcgctggccagc
ggctcggtgggcgcgatctaccgccagttcaccgtggcgatggcggtgtcgatcctgttc
tcggcgctgctggcgttgagcctgaccccggcgctgtgcgcgacgctgctgcgcccgacc
acccatggccatcatggccgcagcgggttgttcggtgccttcaatcgcggcttcgagcgg
atgaccgggcgttaccagcgtggtgttgcatcggtgctgcagcggagcgggcgggtgatg
ggcgtgttcgcggcgctggtcgtggcgctattgctgggcctgcactggctgccgggcgcg
ttcctgccggaggaggaccagggttatttcatgacctcgatccagctgccggccgaggcg
acggccgaacgcaccttggcggtggtcgaagcctacgaacgccatgtggcctcgcggccg
ggcatcggctccaaccaggcgatcctcggctacagcttctccggttccggcccgagcgca
gcgctgacctatacgatgctgaaggactggggtgagcgtgcaggggccaccgcggccggc
gaagtggaggccgcgcagaaggcgatggctgcggttgccgagggcgaggtgatgagcgtg
atgccgcctgccatcgacagcctgggccgatcgtccggcttctcgctggccctgcaggcg
cgcaccgggcagagccaggccgaactgcgcgcggccctgcagcagctgttgaagctggcc
gaggccagtccgctgctgtcggaggtgcatgccgacggcctgccggccggcaccagcgtg
cggctggacatcgatcgggccaaggccgaggcgatgggggtgggcttcgagcacatcagc
agcacgctgtcggcggcgatgggctcgcagtacgtcaacgatttccccaacaagggccgc
ttgcagcaggtgatcctgcaggccgatgcaccccaccggatggaactggaggatgtgctg
aagctgtacgtgcgcaacagcgaaggcggcatggtggcgctgtccgagctggtcaccccg
cactggaccgaggcgccgctgcagctgcagcgctatctcggcttcccggcgttgaatctg
tccggcgcaccggcctcgggcgtatcgaccggccaggccatggcggagatggagcggttg
gcgcagaagctgccgtccggttttgccctgcagtggaccagccagtcgctgcaggagcgc
gaatcgggacagcaggcaccgtggttgttgctgctgtcgatgctggtggtgttcctggtg
ctggcggcactgtacgagagctggtcgatcccgctggcggtgatgctggtggtgccactg
ggcctgctcggtgcggttgctgcggtgctgttgcgtggcatgcccaacgacgtgttcttc
aaggtcggcatgatcaccgtgatcgggctgtcggcgaagaacgcgatcctcatcgtcgag
ttcgcgcgccagctgcagcagcagggtcgcggcctcgttgaagcagcgctggaggcggcg
cggctgcgcctgcggccgatcgtgatgacctcgctggcgttcgcgctgggcgtggtgccg
ctgatgctggcgcagggcgcgtcgaaggaaacccagcaggcgattggaaccggtgtgttc
ggcggcatggtcagtgcgaccgtgctggcggtgttcttcgtgccggtcttctatgtagtg
gtgcagcgcgcgcggcagtggatcgcgcagcggctgcgcaggcgccggccgatgccggaa
ggaaccgtggatggaacgcaacagcgttga
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