Stenotrophomonas pavanii: STNY_R27920
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Entry
STNY_R27920 CDS
T07567
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spaq
Stenotrophomonas pavanii
Pathway
spaq01501
beta-Lactam resistance
spaq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spaq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
STNY_R27920
01503 Cationic antimicrobial peptide (CAMP) resistance
STNY_R27920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spaq03036
]
STNY_R27920
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spaq02000
]
STNY_R27920
01504 Antimicrobial resistance genes [BR:
spaq01504
]
STNY_R27920
Chromosome and associated proteins [BR:
spaq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
STNY_R27920
Transporters [BR:
spaq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
STNY_R27920
Antimicrobial resistance genes [BR:
spaq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
STNY_R27920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
BCX44585
LinkDB
All DBs
Position
3015455..3016729
Genome browser
AA seq
424 aa
AA seq
DB search
MTAPLRTLALTCAVAVALAACKKPEQQTPPPPEVGVIDAEPQTLPLQRELVGRLSPFRSA
DVRARVPGVLLKRVYQEGSQVKQGQTLFLIDPAPLRASLNASEAQLASARATYANAKVAA
DRARSLAPQQFVSKSDLDNAESAERTALAAVKQAEAAVTSSRINLGYAEVTAPISGVANK
QQVTEGALVGQGDVTLLTTVDQLDPLYVNFSLSVDELTQLRAQQAKGALALSGDGKATVA
VKLADGSTYSEPGTLDFSSTTVDPATGAVSLRALLPNPQQILLPGAFVSFQANLGERNNA
YLVPQQALLRDTNGGYVMVVGADGKVVRKNVKTDGAQNGNWLVSDGLAAGDKVIVAGVQK
VKEGAPAVAKPWTPGQDASGKPAAGGAAPAAAAAAPAAGQAPADAAKPEQADAAKPAATD
SNKQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccccactccgcacccttgccttgacgtgcgccgttgctgtcgcgctggctgcc
tgcaagaagccggaacagcagacgcccccgccgccggaggtgggcgtgatcgacgccgag
ccgcagaccctgcccctgcagcgtgagctggtcggccgcctgtcgccgttccgcagcgcc
gacgtgcgcgcgcgcgtgccgggcgtgctgctcaagcgcgtctaccaggaaggctcgcag
gtcaagcagggccagaccctgttcctgatcgacccggcgccgctgcgtgcttcgctcaac
gcctccgaggcccagctggcctcggcccgcgccacctacgccaacgccaaggtcgccgcc
gatcgcgcgcgctcgctggccccgcagcagttcgtctccaagtccgacctggacaacgct
gaatcggccgagcgcaccgccctggccgccgtcaagcaggccgaagcggcggtgacctcc
tcgcggatcaacctgggctacgccgaagtgaccgcgccgatcagtggcgtggccaacaag
cagcaggtcaccgagggcgcgctggtcggccagggcgatgtgaccctgctgaccaccgtc
gaccagctcgacccgctgtatgtgaacttctcgctcagcgtggatgagctgacccagctg
cgtgcgcagcaggccaagggcgcgctggcgctgtccggcgacggcaaggccacggtggcc
gtgaagctggccgatggcagcacctacagcgagccgggcacgctggacttctcttcgacc
acggtcgatccggccaccggcgcggtgtcgctgcgtgcgctgctgccgaacccgcagcag
atcctgctgccgggtgccttcgtcagcttccaggccaacctgggcgagcgcaacaacgcc
tatctggtgccgcagcaggccctgctgcgtgataccaacggcggctacgtgatggtggtc
ggcgccgacggcaaggtcgtgcgcaagaacgtgaagaccgatggcgcgcagaacggcaac
tggctggtcagcgacggcctggccgccggtgacaaggtgatcgtggccggcgtgcagaag
gtcaaggaaggtgcaccggccgtggccaagccgtggaccccgggccaggacgccagcggc
aagccggccgcaggcggcgctgcaccggccgcggctgcggcagcgccggccgcgggccag
gcaccggccgacgcggccaagcccgagcaggccgatgcggccaagccggccgccaccgat
tcgaacaagcagtaa
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