Saprolegnia parasitica: SPRG_11654
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Entry
SPRG_11654 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
spar
Saprolegnia parasitica
Pathway
spar03420
Nucleotide excision repair
spar04120
Ubiquitin mediated proteolysis
spar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SPRG_11654
04120 Ubiquitin mediated proteolysis
SPRG_11654
09124 Replication and repair
03420 Nucleotide excision repair
SPRG_11654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spar04121
]
SPRG_11654
03400 DNA repair and recombination proteins [BR:
spar03400
]
SPRG_11654
Enzymes [BR:
spar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
SPRG_11654
Ubiquitin system [BR:
spar04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
SPRG_11654
Multi subunit type E3
SCF complex
Ring finger protein
SPRG_11654
Cul2 complex
SPRG_11654
Cul3 complex
SPRG_11654
Cul4 complex
SPRG_11654
Cul7 complex
SPRG_11654
Cul8 complex
SPRG_11654
Cul9 complex
SPRG_11654
DNA repair and recombination proteins [BR:
spar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
SPRG_11654
TCR (transcription coupled repair) factors
Cul4-CSA complex
SPRG_11654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-RING_11
zf-C3HC4_2
zf-RING_16
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
24133677
NCBI-ProteinID:
XP_012205991
UniProt:
A0A067C2H1
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MEEEKKAADVDEPKRFEIKKWNAVALWSWDIVVDNCAICRNHIMDLCIECQANQASATSE
ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGR
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaagaaggcggcggacgtggacgagccgaagcgctttgagatcaagaag
tggaacgcggtcgcgctctggagctgggacatcgtcgtcgacaactgcgccatctgccgc
aaccacatcatggacctttgcatcgagtgccaggccaaccaggcctcggcgacgagcgag
gagtgcacggtcgcgtggggcgtgtgcaaccacgccttccacttccactgcattagccgc
tggctcaagacgcgacaggtctgcccgctcgacaaccgcgagtgggagttccaaaagtac
ggccggtaa
DBGET
integrated database retrieval system