Saprolegnia parasitica: SPRG_20587
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Entry
SPRG_20587 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K15083
DNA repair protein RAD16
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spar03400
]
SPRG_20587
DNA repair and recombination proteins [BR:
spar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
SPRG_20587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
zf-PARP
zf-C3HC4
ResIII
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
DEAD
zf-RING_2
FYDLN_acid
zf-C3HC4_4
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
24141679
NCBI-ProteinID:
XP_012202531
UniProt:
A0A067CJW5
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MVARRAARSTEPAPAAAPRPARPARRAQATAIIEVSSSSDEDGDDDMEEAASEEAASEDD
KPLSPPRRGRAARKPAPISHLEMMPSPADDESEDDKPISPPRRGRAARKPTPVVDVKIKP
PADDKSEDDKPISPPRRGRAARKREPVSDLEIKPTPAKKRRVAATKKTIVESDGSDMDDV
SWANAPKLPAKGKGKKKVVVARKVRTLKESSDSDFNASSDASSDAIPAAPPIDSDDDKPI
RPAGSPLKVKAAAKASPAAKPAAPRRRPAPKKKEAKASSTDPDDAARPENAEAAPADPVY
PIYKACYATSGRARCKTCEKTLEKDELVISVTLEHSRFGINSYYKHVACSLLGDGIPLVG
LAALSKNDEAKMVALMAANRAAGLDDERIALREEDFIKREILPGKLPVATLTASLLPYQQ
EGLAWMVNQEASAYRGGILADEMGMGKTVQAIACMLEQIRLEKNDPMLQANGLLPGGTLI
VCPVVACMQWRSEIERFVAKDTLRVLIHHGPKRAKLAAELAMYDVVLTTFSIVESEGRKI
LGADKEPCAYCGKLFLPEKLVLHNKYICGPNARKTSKQAKQQRGKAAKDKAKSFKDAKND
DDDVDDDDDDDDASSEDEAPKKTPVKKVAAKKPVKQGSSPLHEVAWARIILDEAHYIKDR
RCSTARSVFKLTSKFKWCLTGTPLQNRIGELFSLIRFLQVHPFAYYHCAQCACEQIDFQM
KGGHCSLCSHSSMQHYSSFNKKILNPIQAYGYVAEGKVAMLRLQNDLLRHVLLRRTKQSR
ADDISLPPKLIVVRRDAMDEREKDFYESIYTQSKAQFNTYVSAGTLLNNYAHIFDLLIRL
RQAVDHPYLVIYSKINPALQLPTPEQPVKKDLPLSVDVNDDDDDAAAAPSCEFCHEEAED
PVRAACTHTFCKSCVEEYMASLLMNAKALCPTCEEPLTVDLAPPEVPLEELIDVASPRSV
DVSLKKSRGKASLLSKLPQLSDFQSSTKIEALMEEIHRMQESDPSAKGIVFSQFVNMLDL
IEHRLELAGIRCVKLSGSMPMALRDKLLSLFRDDPKLTIFLISLKAGGVALNLTVASHIF
LMDPWWNPAAEHQAIDRTHRLGQFKPIRATRFIVANTIEDRILKLQEKKQLVFEGTVGSS
TAALGRLTVEDLRFLFH
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcacgccgagccgcgcggtcgaccgagccggcgcccgcggccgccccacgccca
gctcgacccgcgcgacgcgcccaagccaccgcgatcatcgaggtctcgtcgagctccgat
gaagatggcgacgatgacatggaagaggcagcaagcgaagaggcagcaagcgaagacgac
aagccgctgtcgccacctcgccgtggccgggccgcgcgcaagccggctcccatctcgcac
cttgagatgatgccgtcgccagccgacgacgagagcgaggacgacaagccgatatcgccg
cctcgccgtggccgcgcagcccgcaaacccacgcccgtcgtggacgtcaagatcaagccg
ccagccgacgacaagagcgaagacgacaagccgatctcgccgcctcgtcgcgggcgcgcc
gctcggaagcgcgagccggtgtcggacctcgagatcaagccgacgcccgccaagaagcgg
cgtgttgcagccacgaagaagacgatcgtcgagtcggacgggtcggacatggacgacgtg
tcgtgggccaacgcgcccaagctgccggccaagggcaagggaaagaagaaggtcgtcgtt
gcacgcaaggtgcgcacgctcaaggagagcagcgacagcgacttcaacgcgtcgtcggac
gccagcagtgacgctatcccggccgcaccccccatcgactcggacgacgacaagccaatt
cggccggcggggtcgcccctcaaggtcaaggcggccgcgaaggcgtcacctgccgccaaa
cccgcagccccccgacgccgtccagcgccaaagaagaaggaagcaaaggcgtcgtccaca
gaccccgacgacgctgcacgtcccgaaaacgccgaagccgcccccgccgaccccgtgtac
ccgatctacaaggcgtgctacgccacaagcggccgcgcgcgctgcaagacgtgcgagaag
acgctcgagaaggacgagctcgtgatctcggtgacgctcgagcactcgcggtttggcatc
aacagctactacaagcacgtggcctgctcgttgctcggcgacgggatcccgctcgtcgga
ctcgccgcgctctccaagaacgacgaggccaagatggtggcgctcatggccgccaaccgc
gcagccggcctcgacgacgagcgcatcgcgctgcgcgaagaagactttatcaagcgcgag
atcctcccgggcaagctgcccgtggcgacgctcaccgccagcttgctgccataccagcaa
gaaggccttgcgtggatggtcaaccaagaggccagcgcataccgcggcggcatcttggcc
gacgagatgggcatgggcaagacggtccaagccatcgcgtgcatgctcgagcaaatccgg
ctggagaagaatgacccgatgttgcaagccaacggtctcttgccgggcggtacgctcatt
gtgtgccccgtcgtggcgtgcatgcagtggcgatccgaaatcgagcgctttgtggccaag
gacacgctgcgtgtgctcatccaccacggcccaaagcgggccaagctcgcggccgagctc
gccatgtacgacgtggtcttgacgaccttttcgatcgtcgaaagtgaaggacgcaagatt
ctgggggcggataaggagccgtgtgcgtactgcggcaagctctttctgcccgagaagctc
gtgctgcacaacaagtacatttgcggcccgaacgcgcgcaagacgtccaagcaagccaag
cagcagcgcggcaaagcagcgaaggacaaagccaagtcgtttaaagacgcgaaaaacgac
gatgacgacgtcgacgacgacgacgatgacgatgacgcgtcgtccgaagacgaggcgccg
aagaagacaccagtgaaaaaagttgcggccaagaaaccggtcaagcaagggtcgtcgccg
ctgcacgaggttgcgtgggcccgcatcatcctcgacgaggcccactacatcaaagatcgt
cgatgcagcacggcgcggtccgtgttcaagctcacgtccaagttcaagtggtgtctcaca
ggcacgccgctccagaaccgcattggcgagctcttttcgctgattcggttcctgcaagtg
cacccgtttgcctactaccactgcgcgcagtgcgcgtgcgagcagattgatttccagatg
aagggcgggcactgcagcctgtgcagccactcgtcgatgcagcactactcgtcgttcaac
aagaagatcctcaacccgatccaagcctacgggtatgtggccgaaggcaaagtggcgatg
ctgcgacttcagaacgatctcttgcgccatgtgttgctgcgccggaccaagcagagccgc
gccgacgacattagtttgccgcccaagctcattgtcgtgcgccgggacgctatggacgag
cgtgagaaagacttttacgagagcatttatacgcagagcaaggcgcagttcaacacgtac
gtctcggccggcacgctgctcaacaactatgcgcacattttcgacctcttgattcggttg
cggcaagcggtcgaccacccgtacctcgtcatttactccaagatcaacccggcgctgcag
ctgccaacgccggagcagccggtgaagaaggatctgccgctctcggtcgacgtgaacgac
gacgacgatgatgctgcggccgcgccgagctgcgagttttgccacgaagaggccgaggac
ccggtgcgcgcggcctgcacgcacacgttttgcaagtcgtgcgttgaagagtacatggcg
tcgctgctcatgaacgcgaaggcgctctgcccgacgtgcgaagagccgctgacggtcgac
ctcgcgccgcccgaggtgccactggaagagttgattgacgtggcgtcgccgcgcagcgtg
gacgtctcgctcaagaagtcgcgcgggaaggcgagtttgctctcgaagctgccgcagctg
agcgactttcagagcagcaccaagatcgaggcgctcatggaggagatccaccgcatgcaa
gagtcggacccgtcggccaaggggattgtgttttcccagtttgtcaacatgctcgacctg
atcgaacaccgcctcgagctggcgggcattcgctgcgtcaagctctcgggcagcatgccc
atggccctgcgcgacaagctgctctcgctctttcgagacgacccgaagctcacgatcttc
ctcatcagtctcaaggccggtggcgtcgcgctcaacctcacggtcgcgtcccacatcttt
ctcatggatccgtggtggaacccggcagccgagcaccaagcgatcgaccgcacgcaccgt
ctcgggcagtttaagcccattcgcgcgacacggttcattgtcgccaacacgattgaggac
cgcatcttgaagctgcaggagaaaaagcagctggtgtttgaaggcaccgttggctcgagc
acggctgcgctcgggcgtctcacggtcgaagacctccgcttcctcttccattag
DBGET
integrated database retrieval system
