Sphingomonas paucimobilis: DRN02_008105
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Entry
DRN02_008105 CDS
T06034
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
spau
Sphingomonas paucimobilis
Pathway
spau00300
Lysine biosynthesis
spau00550
Peptidoglycan biosynthesis
spau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spau00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DRN02_008105
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DRN02_008105
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spau01011
]
DRN02_008105
Enzymes [BR:
spau01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DRN02_008105
Peptidoglycan biosynthesis and degradation proteins [BR:
spau01011
]
Precursor biosynthesis
Amino acid ligase
DRN02_008105
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
QBE91983
LinkDB
All DBs
Position
complement(1732339..1733769)
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AA seq
476 aa
AA seq
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MKLNQLDQSITGEGGDALVTGFAIDHRKVAPGTIFGAFQGARVNGEDFIADAVRSGAIAV
VTRPGVTVEGAVHIASDEPRAAFAQLAAAFFAPFPATAVAVTGTNGKTSTVEMTRQLWRM
AGHHAASIGTLGVTTADERTYTGLTTPDVVTFLSNVAGLAREGVTHLAFEASSHGLTQYR
TEGLEVSAAAFTNLSRDHLDYHGDMGAYLAAKMRLFSEVLSPTGTAVVWADDVQSGRVID
LARARGNRLMTVGTRGSTLKLVERHPTLLGQGLVIEDEHGTIHKVQLPLIGAYQAANALV
SAGLVLATGGDVTTTLANLSRLQPVRGRLERAAIARSGAPVYVDYAHTPDALEAAIAALK
PHAGGRLIVVFGAGGDRDPGKREAMGQVASMQADRVIVTDDNPRTEDPAAIRTQVMRGAT
GAIEIGDRREAIAAAIAEAGGQDIVLIAGKGHEQGQIVGDLVLPFDDVAVARECAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaccaactggaccagagcatcacgggcgagggcggcgacgccctcgtcacc
ggtttcgcgatcgaccaccgcaaggtagcccccggcaccatcttcggcgcgtttcagggt
gcgcgcgtcaatggcgaggatttcatcgccgatgcggtgcgcagcggcgcgatcgcggtg
gtgacgcggcccggcgtgacggtcgagggcgcggtgcatatcgcctcggacgagccccgc
gccgcctttgcgcaattagccgccgccttcttcgcgccgttcccggccacggcggtggcg
gtgaccggcaccaacggcaagacctcgaccgtcgagatgacgcggcagctgtggcgcatg
gccgggcatcacgccgcctcgatcggcacgctgggcgtcaccacggcggacgagcggacc
tataccgggctgaccacgcccgatgtcgtgaccttcctgtccaacgtcgccggactggcg
cgcgagggcgtcacccatttggcgttcgaggcatcgagccacggcctgacccagtatcgg
accgagggcctggaggtgtcggcggcggccttcaccaatttgtcgcgcgatcatctcgac
tatcatggcgacatgggcgcctatctggccgccaagatgcgcctgttctccgaagtgctg
tcgccgacaggcacggcggtggtctgggccgatgacgttcagagcggccgggtgatcgat
ctggcgcgcgcacgcggcaaccggctgatgaccgtcggcacgcgtggatcgaccctgaaa
ctggtcgagcggcatccgaccctgctcggtcaaggcttggtgatcgaggacgagcacggc
acgatccataaggtccagttgccgctgatcggtgcctatcaggcggccaacgcgctcgtc
tcggccggactggtgctggcgacgggcggcgatgtcacgacgacgctggccaatctcagc
cggttgcagccggtgcgtggccggctggagcgggccgccatcgcccgtagcggtgcgccc
gtctatgtcgactatgcccataccccggatgcgctggaggccgcgatcgcagcgctcaaa
ccccatgcgggcgggcggctgatcgtggtgttcggggcggggggcgaccgcgatcccggc
aagcgcgaggcgatggggcaggtcgcttcgatgcaggcggaccgggtgatcgtcactgac
gacaacccacgtaccgaggaccccgccgcgatccgtacgcaggtgatgcgcggcgcaacc
ggcgcgatcgagatcggcgaccgccgcgaggccatcgctgccgccattgccgaggcgggg
gggcaggatatcgtcctgatcgcgggcaaggggcatgagcagggtcagatcgtcggcgat
ctcgtcctgcccttcgacgatgtcgccgtggcgcgcgagtgcgccgcatga
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