Sphingopyxis sp. BSN-002: L7H23_07470
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Entry
L7H23_07470 CDS
T10439
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs00020
Citrate cycle (TCA cycle)
spbs00785
Lipoic acid metabolism
spbs01100
Metabolic pathways
spbs01110
Biosynthesis of secondary metabolites
spbs01120
Microbial metabolism in diverse environments
spbs01200
Carbon metabolism
spbs01210
2-Oxocarboxylic acid metabolism
Module
spbs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spbs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L7H23_07470
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
L7H23_07470
Enzymes [BR:
spbs01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
L7H23_07470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
Motif
Other DBs
NCBI-ProteinID:
UKK85932
LinkDB
All DBs
Position
complement(1504941..1507763)
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AA seq
940 aa
AA seq
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MNLERQSFDVDEVQAGPSWAPKNWPLIDSDDLTAALDPQQMQVAVKAAAAKAGAPLSNAE
VERAANDSIRAMMLIRTYRVRGHLAANLDPLGLSTRELPADLTPEYHGFTGADQDRPVWL
GGALGLEKATVREVVAILRANYCGNVGLEYMHIADIEERQFLQERMEGADKIIEFSVEGK
RAILNKVIQAEEWEKFLARKYVGTKRFGLDGGESMIPAMEAIIKYGGQYGVKEIVYGMAH
RGRLNMLANVMAKPYKVIFHEFSGGSANPDDVGGSGDVKYHLGTSTDREFGGASVHMSLV
PNPSHLEAADPVVLGKVRAQQVVRDDLDKHEQVLPVLIHGDAAFAGQGIVWECLGFSGIR
GYNTGGCIHFIVNNQIGFTTSPQYARSSPYPSDVAKGVMAPILHVNGDDPEAVTFACKLA
IDFRQKFKRDVVIDMWCYRRFGHNEGDEPSFTQPLMYAVIRQHPPVSQLCAAKLEAEGVI
DAGWADARRAEFVAQLEGDFEAAKSYKPNKADWFAGRWSGLHTPADAENARRNIATGVSD
KLFDSIGRTLTTIPGDLEVHKTLRRVIDARAAMFADKSDNEVFDWATAESLAFGTLLSEG
YQVRLSGQDSGRGTFSQRHAVWVDQTDEHKYVPLTTVPHGRFEVLDSPLSEYGVLGFEYG
YAMADPKSLVLWEAQFGDFANGAQIMIDQFIAAGEAKWLRANGLVMLLPHGYEGQGPEHS
SARLERFLQLCAGDNIQVCNISTPSNYFHVLRRQMLRPFRKPLIIMTPKSLLRHKLAVSQ
RSDFIGDAHFRRIMSDRTPPADADIKRVVLCSGKVGYDLMEARDAAGQTDTTVIRIEQIY
PFPGEPLAVRLKRMKNLEEVVWAQEEPRNNGSWFFVEPLIEEALNEAGHKGMRPRYAGRA
AAASPATGLMSRHQTEQSALVADALGLSVRAEIRRAKNKA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgaacgacaaagcttcgacgtcgatgaagtccaggccggccccagctgggcg
ccgaagaactggccgctgatcgacagcgacgacctgaccgccgcgctcgatccgcagcag
atgcaggtcgcggtgaaggccgccgccgccaaggccggcgcgccgctgtcgaacgccgag
gtcgaacgcgcggcgaacgattcgatccgtgcgatgatgctgatccgcacctatcgcgtc
cgcggtcatctggctgcgaacctcgacccgctggggctcagcacgcgcgagctgcctgcc
gatttgacgcccgagtaccacggtttcaccggcgccgatcaggaccgtccggtctggctc
ggcggggcgctcggcctcgaaaaggcgacggtgcgcgaagtcgtggcgatcctgcgcgcg
aactactgcggcaatgtcggcctcgaatatatgcatatcgccgacatcgaggagcgccag
ttcctgcaggaacggatggaaggcgccgacaagatcatcgaattttcggtcgagggcaaa
cgcgccatcctgaacaaggtgatccaggccgaggaatgggagaagttcctcgcgcgcaaa
tatgtcgggacgaagcgcttcggtctcgacggcggcgaatcgatgatccccgctatggaa
gccatcatcaaatatggcggccaatatggcgtgaaggaaatcgtgtacggcatggcgcac
cgcgggcgcctcaacatgctcgcgaacgtcatggccaagccgtacaaggtgatcttccac
gaattttcgggcggcagcgccaaccccgacgatgtcggcggttcgggcgacgtcaaatat
cacctcggcacctcgaccgaccgtgagttcggcggcgcatcggtgcatatgtcgctcgtt
cccaacccgtcgcacctcgaggcggccgatccggtcgtgctcggaaaggtgcgcgcgcaa
caggtcgtgcgcgacgacctcgacaagcatgagcaggtgctgcccgtgctgatccatggc
gacgcggcgttcgcggggcagggaatcgtctgggagtgcctcggcttctcgggcatccgc
ggttataacaccggcggctgcatccacttcatcgtcaacaaccagatcggcttcacgacc
agcccgcaatatgcgcgctcgtcgccctatccgtcggacgtcgcgaagggcgtgatggcg
ccgatcctgcacgtcaacggcgacgatcccgaagcggtgacctttgcgtgcaagctcgcg
atcgacttccgccagaagttcaagcgcgacgtcgtgatcgacatgtggtgctatcgccgc
ttcggccataacgaaggcgacgagccttcgttcacgcagccgctgatgtatgcggtcatc
cgccagcatccgccggtgtcgcagctctgcgccgcgaagctcgaagccgaaggcgtgatc
gatgccggctgggccgatgcccgccgcgccgaattcgtcgcgcagctcgaaggcgatttc
gaggccgcgaaaagctataagccgaacaaggccgactggttcgccggccgctggtcgggg
ctccacacccccgccgatgccgagaatgcgcgccgcaacatcgcgacgggcgtgtcggac
aaattgttcgactcgatcggccgcacgctgacgacgatcccgggcgatctggaagtgcac
aagacgctgcgccgcgtgatcgacgcacgcgccgcaatgttcgccgacaagagcgataac
gaggtgttcgactgggcaaccgccgaaagcctcgccttcggtaccctgctcagcgaaggc
tatcaggtgcgcctttcgggccaggattcgggccgcggcaccttcagccagcgtcacgcg
gtgtgggtcgaccagaccgacgagcataaatatgtgccgctgacgaccgtgccgcacggc
cggttcgaggtgctcgacagcccgctctccgaatatggcgtgctcggcttcgaatatggc
tatgcgatggccgatccgaagagcctcgtgctctgggaagcgcagttcggcgatttcgcc
aacggcgcgcagatcatgatcgaccagttcatcgccgcgggtgaggccaagtggctgcgc
gccaacggcctcgtgatgctgctgccgcacgggtatgaagggcaggggcccgagcacagc
tcggcgcgtctcgaacgcttcctgcagctgtgcgcgggcgacaatatccaggtgtgcaat
atttcgaccccgtcgaactatttccacgtcctgcgccgccagatgctgcgtccgttccgc
aagccgctgatcatcatgacgccgaagtcgctgctccgtcacaagctcgcggtatcgcag
cggtcggatttcatcggtgacgcgcatttccgccgtatcatgtcggaccgtaccccgccc
gccgacgccgacatcaagcgtgtcgtgctctgctcgggcaaggtcggttacgacctgatg
gaagcgcgcgatgctgccggccagaccgatacgacggtgatccgcatcgagcagatctat
cccttcccgggcgagccgctcgcggtgcgcctgaagcggatgaagaatctcgaagaggtc
gtctgggcacaggaagaaccacgcaacaacggcagctggttcttcgtcgagccgctgatc
gaggaggcgctgaacgaagccggccacaagggcatgcgcccgcgctatgccggccgcgcc
gccgccgcctcgcccgcgaccggcctgatgagccgtcaccagaccgaacagtcggcgctc
gtcgccgatgcgctggggctttcggttcgcgccgaaatccgccgcgccaagaacaaagcc
tga
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