Sphingopyxis sp. BSN-002: L7H23_08630
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Entry
L7H23_08630 CDS
T10439
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs01501
beta-Lactam resistance
spbs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L7H23_08630
01503 Cationic antimicrobial peptide (CAMP) resistance
L7H23_08630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spbs02000
]
L7H23_08630
01504 Antimicrobial resistance genes [BR:
spbs01504
]
L7H23_08630
Transporters [BR:
spbs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
L7H23_08630
Antimicrobial resistance genes [BR:
spbs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L7H23_08630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6479
Motif
Other DBs
NCBI-ProteinID:
UKK86145
LinkDB
All DBs
Position
1744570..1747737
Genome browser
AA seq
1055 aa
AA seq
DB search
MTPRFFIDRPIFSWVIAIGILLAGIIALRSLPVEQYPSVAPPSLTISVTYPGADAGTLEQ
NVTQVIEQELNGVEGFLYMASTSESNGTASITLTFEAGTDIDKAQMDVQNRLNRVEQRLP
EDVRRQGITVTEANSGFLLIVAITSKSGNTDPMEVNNFANTRVLDELRRVNGVGNVQAFA
PEYAMRIWLDPQKLASHGLSPAEALGAVQEQNSQTPGGQLGDQPIAKGAQLNAVITTQGR
FTKPEQFESIILRANPDGSAVTLGDVGRVELGAASYLFSSELNGKPMAGLAVQLTPGANA
LSTAEGIRTRMDELSKGFPPDITWSIPYDTTPFISLSIEEVVKTLGEAMLLVFLVMFLFL
QNWRATVIPTVVVPIALAGACLGLWAAGFSINVLTLFGMVLAIGILVDDAIVVIENVERI
MSEEHVSPYEATVKAMGQITSAIIGITLVLIAVFIPMAFFPGSTGGIYRQFSLTLAISIA
FSALLALTLTPALCATLLKPHDNTVRKGPIGERADRFFAGFNGWFGRTTDRYQGRVGRIL
SAPLRWLGIFVAMVAVTALLFTRLPGSFLPQEDQGYLITVIQAPPGATTQRTNEATKQVK
AFFAAQPQVANVVSVNGFSFFGQGQANAIMFTPLKPWEDRKGKENSADAIAGKAMGAFMG
IKQAFVFSLSPPSIPELGTASGFTFKLQDRGGNGRAALMQARNQMLGGAMQSKTLANVRP
EGQEDAPVLRVDIDRIKARALGLSIGDVNATLAIAFGSAYANDFTREGRVLRVLIQADAA
SRMTPQDVVDLKVRSADGQMVPFGSFSTAKWSADAPQLQRYNGYPAMTISGEPAPGQSTG
EAMAEMERLAASLPAGFAYEWTGISYEEKQSSGQIGMLLGLSLVVVFLLLAALYESWSVP
VAVLLVVPLGVLGAVLFSMLRGLSADIYFNVGLITIIGLSAKNAILIVEFAIEQEAEGKS
TLDAVMEAVKLRLRPIIMTSLAFILGMVPLVIASGAGAASRIAVGSGVMGGMIAATLLGI
FFIPLFYLSVRKWISRKRPPSPAEKGHHEPEPDHA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaccccccgcttcttcatcgaccggcccatcttttcatgggtcatcgcgatcggcatc
ctgctcgccgggatcatcgcgctgcgcagccttcccgtcgaacaatatccgtcggtcgcc
ccgccatcgctgacgatcagcgtcacctatcccggcgccgacgccggcacgctcgaacag
aatgtcacccaggtcatcgagcaggagctcaacggcgtcgagggcttcctctatatggcg
tcgaccagcgaatcgaacgggacggcgtcgatcacgctgaccttcgaggcggggaccgac
atcgacaaggcgcagatggacgtccagaaccgcctcaaccgtgtcgagcaacggctgccg
gaggacgtgcgtcgtcaggggatcacggtgaccgaggcgaactcgggcttcctgctgatc
gtcgcgatcacgtcgaagagcggcaacaccgacccgatggaggtcaataatttcgccaac
acgcgcgtgctcgacgagcttcgccgcgtgaacggcgtcggcaacgtccaggcctttgcg
cccgaatatgcgatgcgcatctggctcgatccgcaaaagctcgcctcgcatggtctgtcg
cccgccgaagcgctcggcgcggtgcaggaacagaacagccagacccccggcggccagctc
ggcgaccagccgatcgcgaagggggcgcagctcaacgccgtgatcacgacgcagggccgc
ttcaccaagcccgagcagttcgaaagcatcatcctgcgcgccaaccccgacgggtcggcg
gtgacgctgggcgatgtcggtcgggtcgaactcggcgcggcaagctatctcttctcgtcc
gaactcaacggcaaaccgatggcggggctcgcggtccagctcacgcccggcgccaacgcg
ctgtcgaccgccgaaggcatccggacgcggatggacgagctgtcgaagggatttccgccc
gacatcacatggtcgatcccgtacgacaccacgcccttcatcagcctgtcgatcgaggaa
gtggtcaagacgctgggcgaggcgatgctgctcgtcttcctggtcatgttcctgtttctc
cagaactggcgcgcgacggtgatcccgaccgtcgtcgtcccgatcgcgcttgcgggcgcc
tgtctcgggctctgggccgccggcttctcgatcaacgtgctgaccttgttcgggatggtg
ctggcgatcggcatcctcgtcgacgatgcgatcgtcgtgatcgagaatgtcgaacgcatc
atgagcgaggaacatgtctcgccctatgaagcgaccgtgaaggcgatggggcagatcacc
tcggcgatcatcggcatcacgctggtgctgatcgcggtgttcatcccgatggccttcttc
cccggatcgacgggcggcatctatcgccagttctcgctgacgctggcgatctcgatcgcc
ttctcggcgctgctcgcgctgacgctgaccccggccctgtgcgcgaccttgctgaaaccg
cacgacaacacggtccgaaagggcccaatcggcgaacgcgccgaccgcttctttgcgggc
ttcaacggctggttcggccgcacgaccgaccgctatcagggccgcgtcgggcgcatattg
tcggcgccgctgcgctggctcggcatcttcgtcgcgatggtcgcggtgaccgcgctgctg
ttcacccgcctgcccggctcgttcctgccgcaggaggatcagggctatctgatcaccgtc
atccaggcgcccccgggcgcgacgacccagcgcaccaatgaagcgaccaagcaggtgaag
gccttctttgccgcacagccgcaggtcgccaatgtcgtatcggtcaacggcttcagcttc
tttgggcagggacaggcgaacgcgatcatgttcacgccgctgaagccgtgggaagaccgc
aagggcaaggaaaacagcgccgacgcgatcgccggcaaggcgatgggcgccttcatgggg
atcaagcaggccttcgtcttctcgctgagcccgccgtcgatccccgaactcggcaccgcg
agcggctttaccttcaagctgcaggaccgcggcggcaacggccgcgccgcgctgatgcag
gcgcgcaaccagatgctcggcggcgcgatgcagagcaagacgctcgccaacgtccgcccc
gagggtcaggaggacgcccccgtgctgcgcgtcgacatcgaccgcataaaggcgcgcgcg
ctcggcctgtcgatcggcgacgtcaatgcgacgctcgcgatcgccttcggcagtgcctat
gccaacgacttcacgcgtgagggccgcgtgctgcgcgtgctgatccaggccgacgccgcg
agccgcatgaccccgcaggacgtcgtcgacctgaaggtgcgcagcgccgacgggcagatg
gtccccttcgggtcgttcagtaccgccaaatggtcggccgacgcgccgcagctccagcgc
tacaacggctatcccgcgatgacgatctcgggcgagcccgctcccggccagtcgaccggc
gaggcgatggccgagatggagcggcttgccgcctccctgcccgcgggcttcgcctatgaa
tggaccggcatctcgtacgaggagaaacagtcgtcgggtcagatcgggatgctgctcggc
ctgtcgctcgtcgtcgtcttcctgctgctcgcggcactctatgaaagctggtcggttccc
gtcgcggtgctgctcgtcgtgccgctgggcgtgctcggcgcggtgctcttttcgatgttg
cgcggactcagcgccgacatctatttcaacgtcggactgatcacgatcatcggcctttcg
gcaaagaatgcgatcctgatcgtcgagttcgcgatcgagcaggaggccgaaggcaagtcg
acgctcgacgcggtcatggaagcggtaaagctgcgcctccgcccgatcatcatgaccagc
ctcgccttcatcctcggcatggtaccgctcgtcatcgccagcggcgctggcgcggcgagc
cgcatcgcggtcgggtcgggcgtgatgggcgggatgatcgccgcgacgttgctcggcatc
ttcttcatcccgctcttctacctctcggtgcgcaagtggatcagccgcaagcggccgccg
tcaccagccgaaaagggccatcacgagccggagcccgatcatgcgtaa
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