Sphingopyxis sp. BSN-002: L7H23_09350
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Entry
L7H23_09350 CDS
T10439
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L7H23_09350 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spbs03400
]
L7H23_09350 (nth)
Enzymes [BR:
spbs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L7H23_09350 (nth)
DNA repair and recombination proteins [BR:
spbs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L7H23_09350 (nth)
Prokaryotic type
L7H23_09350 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UKK82781
LinkDB
All DBs
Position
complement(1896795..1897454)
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AA seq
219 aa
AA seq
DB search
MKKADIFEFYRRLAELNPSPETELEFGNTYQLLVAVVLSAQATDVGVNKATRRLFQDVKT
PQQMVDLGEDGLKQHIKTIGLFNAKAKNVIALSEILVRDFGGEVPADRDTLVELPGVGRK
TANVVMNCAFGAETFAVDTHIFRVGNRTGLAPGKTVLAVEKKLDKETPGPFRVGAHHWLI
LHGRYICKARTPECWRCPVDDLCRYKPKTPAPKAKRAAA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagccgacatcttcgagttctaccgccgtctcgccgagctcaatcccagcccc
gagaccgagcttgaattcggcaacacttaccaattgctcgttgccgtcgtgctctcggcg
caggcgaccgatgtcggggtgaacaaggcgacgcggcggctgtttcaggatgtgaagacg
cctcagcaaatggtcgacctcggcgaggacggcctcaagcagcacatcaagacgatcggg
cttttcaacgccaaggcgaagaatgtcatcgcgctcagcgaaatcctcgtccgcgatttc
ggcggcgaggtgcccgccgaccgcgacacgctcgtcgagttgccgggggtcgggcgcaag
accgccaatgtcgtgatgaactgcgccttcggggcggagaccttcgcggtcgacacgcac
atcttccgcgtcggcaaccgcaccggcctcgcgcccggcaagacggtgctcgcggtcgag
aagaaactcgacaaggaaacgccgggccccttccgcgtcggcgcgcatcactggctgatc
ctccatggccgctatatctgcaaggcgcgcacgcccgaatgctggcgctgcccggtcgac
gacctctgccgctacaagccgaagacccccgcgccgaaggcaaaacgggcagcggcgtaa
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