Sphingopyxis sp. BSN-002: L7H23_11555
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Entry
L7H23_11555 CDS
T10439
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs01501
beta-Lactam resistance
spbs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L7H23_11555
01503 Cationic antimicrobial peptide (CAMP) resistance
L7H23_11555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spbs03036
]
L7H23_11555
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spbs02000
]
L7H23_11555
01504 Antimicrobial resistance genes [BR:
spbs01504
]
L7H23_11555
Chromosome and associated proteins [BR:
spbs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
L7H23_11555
Transporters [BR:
spbs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
L7H23_11555
Antimicrobial resistance genes [BR:
spbs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L7H23_11555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
HH_AAEA_pHBA
HH_EMRA
BSH_CusB
HH_YBHG
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UKK83203
LinkDB
All DBs
Position
complement(2343955..2345145)
Genome browser
AA seq
396 aa
AA seq
DB search
MTNKTPLLLIGALCIATLSLGACSGKEDEGRGNRTPQVGYVVVKVEPVPLTTSLGGRTVA
FETSEVRPQVNGIVRRRLFTEGGFVRAGQPLYQIDASLYQAAVDQAEANLASARANVQAA
EEKARRFEPLAKIQAVSQQDYSDALAAARAARAAVAQNAAALETARINLRYTTLSAPISG
RIGRSLVTPGGLASAGQATPLAVIQQTDPMYVDMQQSSADLTRLRQALASGGVTPGSTSV
RLKLEDGSDYGFAGTVQFSEVTVNEGTGTVTLRARFANPQGLLLPGMFVTALFDQAINPT
AMLVPQAAVQRDFDGSAFVYLVGKDNKAARRKIVAERTVGPNWVVTDGLKPGDKVITQGV
GNLKQGAPIKPVPASSPQRLGAPAGKGAEKGAAKGN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaagacgccgttgctcctgatcggggccctttgcattgcaacactttcgctc
ggcgcctgttcgggcaaggaagacgaaggacgcggcaaccgcacgccgcaggtcggctat
gtcgtggtgaaggtcgaaccggtaccgctcaccacgtcgctcggtgggcgcaccgtcgca
ttcgagacgagcgaagtgcggccgcaggtcaatggtatcgtgcgccgccggctgtttacc
gaaggcggcttcgtacgtgccggtcagccgctctatcagattgacgcgagcctctatcag
gcggcggtcgatcaggccgaagccaatctcgccagcgcgcgggccaatgtgcaggcggcc
gaggagaaggcacggcgtttcgaaccgctggcaaagatccaagcggtgtcgcaacaggat
tacagcgatgcgctggcggccgcccgcgccgcccgggctgcggtggcgcaaaatgccgcc
gcgctggaaaccgcacggatcaacctgcgctatacgacgctgtccgccccgatcagcggg
cgcatcggccgttcgctcgtcacaccgggcggactggcgagcgcggggcaggcgaccccg
ctcgccgtgatccagcagaccgatccaatgtatgtcgacatgcagcagtcgagcgccgac
ctcacgcgcctgcgtcaggcgctcgcgagtggcggggtgacgccgggcagcacctctgtg
cggctgaagctcgaggacggcagcgattatggcttcgccggcacggtccagttttccgaa
gtgacggtcaatgaaggaaccggaacggtgacgttgcgcgcgcgcttcgccaacccgcag
ggattgctgctgcccggcatgttcgtgaccgcgctgttcgaccaggcgatcaatccgacc
gcaatgctggtaccgcaggcggcggtgcagcgcgatttcgacggatcggctttcgtctat
ctggtcggcaaggacaacaaggcggcgcggcgcaagatcgtcgccgaacgcaccgtcggc
ccgaactgggtcgttaccgacgggctgaagcccggcgacaaggtcattacgcagggggtc
ggcaacctgaagcagggtgctccgatcaagccggttccggcaagcagtccgcagcgtctg
ggcgcgcccgcgggcaagggcgccgaaaagggcgcggcgaaaggaaactga
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