Sphingopyxis sp. BSN-002: L7H23_15805
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Entry
L7H23_15805 CDS
T10439
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spbs Sphingopyxis sp. BSN-002
Pathway
spbs01501
beta-Lactam resistance
spbs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spbs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L7H23_15805
01503 Cationic antimicrobial peptide (CAMP) resistance
L7H23_15805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spbs03036
]
L7H23_15805
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spbs02000
]
L7H23_15805
01504 Antimicrobial resistance genes [BR:
spbs01504
]
L7H23_15805
Chromosome and associated proteins [BR:
spbs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
L7H23_15805
Transporters [BR:
spbs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
L7H23_15805
Antimicrobial resistance genes [BR:
spbs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L7H23_15805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF6406
Motif
Other DBs
NCBI-ProteinID:
UKK86350
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Position
3194536..3195711
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AA seq
391 aa
AA seq
DB search
MDSLAGTQSFYEDQDNRRKRMLTIAAVALIAVVLLGVWYAFAHSKGDDAAAGGAGGAGAQ
NVPNVTVMIPGRVSVQAAIAANGTIAARREMPVGVAGEGGQVVRVLVEPGQWVGAGQTLA
IIDRSVQSQQAASLAASIKVSQADADLAQAELERAQALVGRGFISKADMDRKRATRDAAN
ARVRVAQAQYQEAVARNGRLNIVAPEAGLVLTRQVEPGQVVGAGSGVLFRMAKGGEMEML
AQLAEADLQRVRVGTTATVTPVGTSLQIAGQVWQVAPIVNMDTRQGTVRIAIPYSAALRP
GGFADARLVSGTEQAPLLPESAVQSGPEGNFVLIVGADNKIARKPVKVGTVTDGGVSIAS
GLTGNEKVVVLAGAFLNPGDKVKPVLQKSSQ
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggacagcctcgcggggacgcaaagcttttacgaagatcaggacaaccgccgcaagcgg
atgctgacgatcgccgccgtggcgctgatcgcagtcgtgctgctcggcgtctggtacgcg
ttcgcccacagcaagggcgacgacgcggcggccggtggcgccggcggtgcgggcgcccag
aacgtcccgaacgttaccgtgatgatcccgggccgtgtttcggttcaggcggcgattgcc
gccaacggcacgattgcggcgcgtcgcgaaatgcccgttggcgttgccggcgaaggcggt
caggtcgttcgtgtgctcgtcgagcccggccagtgggtcggcgccggccagacgctcgcg
attatcgaccgttcggtccagtcgcagcaggccgcgagccttgccgcctcgatcaaggtg
tcacaggccgacgccgaccttgcgcaggccgaacttgagcgcgcacaggcgctggtcggg
cgcggcttcatttccaaggccgacatggaccggaagcgcgcgacccgcgatgctgccaat
gcgcgcgttcgtgtcgcgcaggcgcagtatcaggaagcggtcgcacgcaacggacgcctc
aacatcgtcgctccggaagccggtctggtcctgacgcggcaggtcgagccgggtcaggtc
gtgggtgcaggaagcggcgtgctgttccgcatggcgaagggcggcgagatggaaatgctc
gcgcagctcgccgaggccgatctccagcgcgtccgggtcggcacgactgcaacggtaacg
ccggtcggcaccagcctgcagatcgcgggtcaggtgtggcaggtcgcgccgatcgtcaac
atggatacgcgccagggtacggtgcggatcgccatcccgtacagcgcagcgctgcgtccc
ggcggcttcgccgacgcacggctcgtctcgggcaccgaacaggcgccgctgcttcccgaa
agcgcggtgcagagcgggcccgaaggcaatttcgtcctgattgtgggtgcggacaacaag
atcgcacgcaagccggtgaaggtcggaacggtgaccgacgggggcgtgtcgatcgcgtcg
ggcctgaccggcaacgaaaaggtcgtcgtgctcgccggtgcgttcctcaaccccggcgac
aaggtgaagccggtgttgcagaaatcgtcgcagtaa
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