Shewanella putrefaciens CN-32: Sputcn32_0105
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Entry
Sputcn32_0105 CDS
T00513
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc01501
beta-Lactam resistance
spc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sputcn32_0105
01503 Cationic antimicrobial peptide (CAMP) resistance
Sputcn32_0105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spc03036
]
Sputcn32_0105
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spc02000
]
Sputcn32_0105
01504 Antimicrobial resistance genes [BR:
spc01504
]
Sputcn32_0105
Chromosome and associated proteins [BR:
spc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sputcn32_0105
Transporters [BR:
spc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sputcn32_0105
Antimicrobial resistance genes [BR:
spc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sputcn32_0105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_CzcB
BSH_RND
BSH_CusB
Biotin_lipoyl
RND-MFP_C
BSH_YknX
CzcB_C
ADIP
Motif
Other DBs
NCBI-ProteinID:
ABP73841
UniProt:
A4Y1K8
LinkDB
All DBs
Position
complement(120441..121487)
Genome browser
AA seq
348 aa
AA seq
DB search
MRYLIVSLCLLCSAAYATTPVTVALPQLGSANELLPLSGSIKSARVARLSPRTDGLVAQV
LVDAGAKVKAGQPLLKLDDTLAVHQLTQRQADMMAATTQLTEKQRLLTEAQTLSSQQLFP
ETERAMRQAALAEAKANLQNAEAALAYQKEVVARHQLIAPFAGVISSKQTETGEWVDVGT
EIFTLVSQEQLWLDIQVPQEMFQQITTATQIEIAADMLPTKQFTGQVSALVPVSDHNARS
FLMRLTIPDANSQLMPGTSATATFHLQREQHSLVIPQDALVRHPDGQFSVFTVQNNIAQR
HSVKIGRSSAIGIEILSTLPEGAPVVIRGNENLQDQQAVSVINHSVGG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgcggtatttaatagtcagtttatgcctgttatgttcagcagcatacgcaacaacacca
gtcacggttgccttaccccaactgggcagcgccaacgaactgttaccattgagtggttct
attaaatccgcacgagttgcccgtctatcacctcgtaccgatgggctagtagcgcaagtg
ttagttgatgcaggggcgaaggtcaaagcagggcagccactacttaagctcgacgatacc
ttggcagtgcaccaattaacccaacgccaagccgatatgatggctgctactacccaactg
acagaaaaacagcgcctgttaaccgaagcgcaaaccttaagttcccaacaactttttcca
gaaactgaacgagcgatgcgtcaagcagcactcgcagaggctaaagctaacctacaaaat
gccgaggctgcgctggcgtaccaaaaagaagtggtggctcgccatcaactcattgcgcct
tttgcaggcgtgatttcaagtaaacaaactgaaacgggtgaatgggtcgatgttggcact
gaaatattcactttagtatcccaagaacaactctggctagatatccaagtaccacaggaa
atgttccaacagatcaccacagcaactcaaattgagatagctgccgatatgctgccaaca
aaacaatttactgggcaagtcagcgctctcgtccccgttagcgatcacaatgcccgtagc
ttcttgatgcgattaaccatccccgatgccaattcacagttaatgcctggcacatcggca
acggcgacctttcacttacagcgcgagcaacacagtttagtgattccgcaggatgcctta
gtccgccaccccgatggccagtttagtgtctttaccgtacaaaataatattgcccaacgt
catagtgtcaaaattggtcgtagcagcgcaattggtatagagatcctcagcacactacct
gaaggagcccccgtggtcattcgtggtaacgaaaatctacaggatcaacaagccgtttct
gtcattaatcacagtgtaggaggctag
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