Sphingobium sp. CAP-1: GL174_01990
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Entry
GL174_01990 CDS
T10467
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spca Sphingobium sp. CAP-1
Pathway
spca01501
beta-Lactam resistance
spca01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GL174_01990
01503 Cationic antimicrobial peptide (CAMP) resistance
GL174_01990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spca03036
]
GL174_01990
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spca02000
]
GL174_01990
01504 Antimicrobial resistance genes [BR:
spca01504
]
GL174_01990
Chromosome and associated proteins [BR:
spca03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GL174_01990
Transporters [BR:
spca02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GL174_01990
Antimicrobial resistance genes [BR:
spca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GL174_01990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
Beta-barrel_RND
RND-MFP_C
CzcB_C
BSH_CusB
BSH_RND
BSH_CzcB
BSH_ALG44
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
QGP77905
LinkDB
All DBs
Position
MIN1:394911..395951
Genome browser
AA seq
346 aa
AA seq
DB search
MRPLLPIALIALSLAGCGAKREEKPRAVPLVEVGAVAPTRFTDALEAVGTALANEQVVLS
APVTERITALHFADGGYVAKGQVVATLAVGQEKAELASAEATALQAGQQLQRIQALQARG
FATGATLEQQTAAANAARANADLARASIGDRIIRAPFAGWVSLRTVSPGAIVTAGTAIAT
VSDISRIKLDFTVPETRLAMIREGMPIRAIAAAWPDRPFSGTIATIDPVIDPATRAVRVR
AILPNPDHALKPGMLLTVSVLAGDRQSLAVPELAVVGDGDERFVFVLEDRTAKRVKVDTG
IRQNGLVEITAGLKPGQKVVTEGVVKLTDGVKVRLAGDRPAAKAAG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccctgcttcccattgccctgattgccctgagccttgccggttgcggcgcgaag
agggaggaaaagccccgcgccgtgccgctggtggaggtcggcgccgtcgccccgacccgt
ttcaccgacgcgctggaagcggtcggcaccgcgctcgccaatgaacaggtcgtgctatcc
gcgccggtgacggaacggatcaccgcgctccatttcgccgatggcggctatgtggccaag
ggacaggttgtcgcgacgctggcggtcgggcaggagaaagccgaactcgcctccgctgaa
gcgaccgcactccaggccggccagcaactccagcgcattcaggcattgcaggcgcgcggt
ttcgctaccggcgcaacgctggagcagcagaccgccgccgccaatgcggcgcgcgccaat
gccgacctggcccgcgcctcgatcggtgatcgcatcattcgcgcgcccttcgccggctgg
gtatccttgcgcactgtgtcgcccggcgcgattgtcaccgccggcaccgccatcgccacg
gtcagcgacatcagccggatcaagctggacttcaccgtccccgaaacccggctggcgatg
atccgcgaagggatgccgatccgggccatcgccgccgcctggcccgaccggccgttcagc
ggcacgatcgcgactatcgatccggtgatcgatcccgccactcgcgcggtcagggtgcgc
gccatcctgcccaatcccgatcatgcgctgaagccgggcatgttgctgaccgtcagcgtc
ctcgcgggcgatcgccagtcgcttgccgtgcctgaactggccgtggtcggcgacggcgac
gaacgcttcgtattcgtgctggaggaccgcaccgccaaaagggtgaaggtcgataccggc
atccgccagaacggcctggtggaaatcaccgccgggctgaaaccggggcagaaggtcgtg
accgaaggcgtggtcaagctgacggatggcgtcaaggtgcgccttgccggtgacaggccc
gccgccaaggcagccggctga
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