Sphingobium sp. CAP-1: GL174_04425
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Entry
GL174_04425 CDS
T10467
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spca Sphingobium sp. CAP-1
Pathway
spca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GL174_04425 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spca03400
]
GL174_04425 (nth)
Enzymes [BR:
spca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GL174_04425 (nth)
DNA repair and recombination proteins [BR:
spca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GL174_04425 (nth)
Prokaryotic type
GL174_04425 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QGP78314
UniProt:
A0A6I5YKX6
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All DBs
Position
MIN1:complement(916683..917345)
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AA seq
220 aa
AA seq
DB search
MKKAEIFDFFSRLAEANPAPVTELEYGNAYQLLVAVTLSAQATDVGVNKATRALFREVET
PQQMVDLGEEGLKQHIKTIGLFNTKAKNVIGLSEILVRDFGGEVPQDRDTLTTLPGVGRK
TANVVVNTAFGQETFAVDTHIFRVGNRTGLAPGKTVLAVEQKLDKHVPGPFRRDAHHWLI
LHGRYVCKARTPECWRCIVADLCRFRPKTPAPKSAAPKAA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagccgaaatcttcgactttttcagccggctggcggaggccaatcccgcgccc
gtgaccgagctggaatatggcaatgcctatcagttgctggtcgcggtgactctgtcggcg
caggccaccgatgtcggcgtgaacaaggcgacccgcgcgctgttccgcgaagtcgaaacg
ccgcagcaaatggtcgatctgggcgaagaggggctgaagcagcatatcaagacgatcggc
ctgttcaacaccaaggcgaagaatgtcatcggcctgtcggaaatattggttcgcgatttt
ggcggggaagtgccgcaggatcgcgatacgctgaccaccctgcccggcgtcgggcgcaag
accgccaatgtcgtggtcaataccgccttcgggcaggagacgttcgcggtcgacacccat
atcttccgcgtcggcaaccgcacggggctggcgccgggcaagacggtgctggcggtcgag
cagaagctggacaagcatgtccccggccccttccgccgcgacgcgcatcactggctgatc
ctgcatggccgctatgtctgcaaggcgcggacgcccgaatgctggcgctgcatcgtcgcc
gacctgtgccggttcaggcccaagaccccggcgccgaaatctgccgcgcccaaagccgcc
tga
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