Sphingobium sp. CAP-1: GL174_07355
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Entry
GL174_07355 CDS
T10467
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
spca Sphingobium sp. CAP-1
Pathway
spca00020
Citrate cycle (TCA cycle)
spca00785
Lipoic acid metabolism
spca01100
Metabolic pathways
spca01110
Biosynthesis of secondary metabolites
spca01120
Microbial metabolism in diverse environments
spca01200
Carbon metabolism
spca01210
2-Oxocarboxylic acid metabolism
Module
spca_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spca_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GL174_07355
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GL174_07355
Enzymes [BR:
spca01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
GL174_07355
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
QGP78826
UniProt:
A0A6I5YJX0
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Position
MIN1:complement(1538789..1541599)
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AA seq
936 aa
AA seq
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MGYENQDVFDGVGEVERGPSWARDNWPLSDTDDLTGAMDPTQMQVAVKAAAKSAGKAVSD
ADAVAAADDAIRAQMLIRTYRVRGHLAANLDPLGLSKRDLPADLTPEYHGLTDPAKKVYL
GGTLGLQYATVAEIVAILRANYCGNVGLEYMHIADVEERRFLQDRLEGKDKEIHFTPEGK
KAILAKVIQGEQYEKFLGRKYVGTKRFGLDGGESMIPALEAVIKYGGSSGVREIVFGMAH
RGRLNVLANVMAKGFRVIFHEFSGGTANPEDVGGSGDVKYHLGTSTDREFDGIKVHMSLV
PNPSHLETVDPVVLGKVRAQQTFRDDLDKHEQVLPVLIHGDAAFAGQGIVWECLGFSGVP
GYNTGGCIHFIVNNQIGFTTSPQFSRGSPYPSDVAKGVQAPILHVNGDDPEAVTFACKLA
MEYRQAFHRDIVIDMWCYRRFGHNEGDEPGFTQPLMYKEIRQHPPVSDVYAARLKAQGVV
DDAFVTKSTDDFVAHLEDEFEAAKSYKANKADWFAGRWSGLHKPADAETARQSIDSAISN
KLFDGLGKTLTTVPEGHNIHKTLKRVLDAKAEMFKTGANFDWATGEALAFGSLLSEGYGV
RLSGQDSGRGTFSQRHAVWTDQDSEAKYIPLSTVPHGRFEVLDSPLSEYGVLGFEYGFAL
ADPKSLVIWEAQFGDFANGAQIIFDQYIASSETKWLRSNGLVCLLPHGYEGQGPEHSSAR
LERYLQLCAEGNIQVANITTPANYFHALRRQMLRPFRKPLIIMAPKSLLRHKLAVSKAED
FLGETHFKRILSDPNGSADKETKRLVLCSGKVFYDLMEARDAAGDKDVQIVRIEQIYPFA
TEALATRIARMTNLQEVVWCQEEPRNNGAWFFVEPYVEEALAKAGKAPMRARYAGRKASA
SPATGLAKRHVAEQGALVADALGHSVREEIRRQKKG
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgggttacgagaaccaggacgtttttgatggggtcggggaagtcgagcgcggcccaagc
tgggcgcgcgacaactggccgctgagcgataccgacgatctgaccggggcgatggacccc
acgcagatgcaggtcgcggtgaaggccgccgccaagtccgcgggcaaggccgtgtcggac
gccgatgccgtcgccgcggccgatgatgcgatccgcgcccagatgctgatccgcacctat
cgcgtgcgtggccatctggccgccaatctcgatccgctgggcctgtccaagcgcgacctt
ccggccgatctgacgccggaatatcatggcctgaccgatcccgccaaaaaggtctatctg
ggcggcacgctgggcctgcaatatgcgaccgtggcggagatcgtcgcgatcctgcgcgcc
aattattgcggcaatgtcggccttgaatatatgcacatcgccgatgtggaggagcgccgc
ttccttcaggatcggctggaaggcaaggacaaggaaatccacttcacgcccgaaggcaag
aaggcgatcctggccaaggtcatccagggcgagcagtacgaaaaattcctgggccgcaaa
tatgtcggcaccaagcgctttggcctcgatggcggcgaatccatgatccccgcgctcgaa
gccgtcatcaaatatggcggttcgtcgggcgtgcgcgagatcgtgttcggcatggcccat
cgcggccgcctgaacgtgctggccaatgtgatggccaagggcttccgcgtcatcttccac
gaattttcgggcggcaccgccaaccccgaagatgtcggcggttcgggcgacgtgaaatat
catctcggcacttcgaccgaccgtgagtttgacggtatcaaggttcatatgtcgctggtc
cccaacccgtcgcatctggaaacggtcgacccggtggtgctgggcaaggtccgcgcgcag
cagaccttccgcgacgatttggacaagcatgagcaggttctgccggtgctgatccatggc
gacgccgcctttgccgggcagggcatcgtctgggaatgcctcggcttctccggcgtcccc
ggttacaataccggcggttgcatccacttcatcgtcaacaaccagatcggctttaccacc
agcccgcaattctcgcgcggttcgccctatccgtccgacgtggcgaagggcgttcaggca
ccgatcctgcacgtcaatggcgacgaccccgaagccgtgaccttcgcctgcaagctggcg
atggaatatcgtcaggccttccatcgcgacatcgtgatcgacatgtggtgctatcgccgc
ttcggccataatgaaggcgacgagccgggcttcacccagccgctgatgtataaggaaatt
cgtcagcatccccctgtcagcgacgtgtatgcggcgcggctgaaggcgcagggcgtggtc
gacgatgcctttgtcaccaaaagcaccgacgatttcgtcgcgcatctggaggacgagttc
gaggcggccaagagctacaaggcgaacaaggccgactggttcgccggtcgctggtcgggc
ctgcacaagccggccgacgccgaaaccgcgcgccagagcattgactcggcgatcagcaac
aagctgttcgacggtctgggcaagacgctgaccaccgttcctgaaggtcacaacatccac
aagacgctgaagcgcgtgctggatgccaaggccgagatgttcaagaccggcgcgaatttc
gactgggcgacgggtgaggcgctggccttcggttcgctgctgtcggaaggctatggcgtg
cgcctgtcggggcaggactccgggcgcggcactttcagccagcgtcatgcggtctggacc
gatcaggatagcgaggcgaaatatatcccgctttcgaccgtgccgcacggccggttcgag
gtgctggacagcccgttgtccgaatatggcgtgctgggcttcgaatatggcttcgcgctg
gcggacccaaagagcctggtgatctgggaagcgcagttcggcgacttcgccaacggcgcg
cagatcatcttcgaccagtatatcgcttcgtcggaaaccaagtggctgcgctccaacggc
ctcgtctgcctgttgccgcacggctatgaggggcaggggccggaacatagttcggcgcgt
ctggagcgctatctccagctctgtgcggaaggcaatatccaggtcgcgaacatcacgacc
ccggccaattacttccacgcgctgcgtcgccagatgctgcggccgttccgcaagccgctg
atcatcatggcccccaagtcgctgctgcgccacaagctggcggtcagcaaggccgaggat
ttcctgggcgaaacgcacttcaagcgcatcctgtcggaccccaacgggtcggccgacaag
gagacgaagcgcctggtgctgtgttccggcaaggttttctatgacctgatggaagcccgc
gacgccgccggcgacaaggacgtgcagatcgttcgcatcgagcagatctatccgttcgcg
accgaggcgctggctacccgtatcgcgcggatgaccaatttgcaggaagtcgtctggtgt
caggaagaaccgcgcaacaacggcgcctggttcttcgtggaaccctatgtcgaggaagcg
ctggccaaggccggcaaggcgccgatgcgcgcccgctatgccggccgcaaggcgtcggcc
tcgcccgctacgggcttggccaagcgccatgtcgccgagcagggcgccctcgtcgccgat
gcgctgggtcacagcgttcgtgaagaaatccgtcgccagaagaaaggctga
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