Sphingomonas sp. CL5.1: F9288_16425
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Entry
F9288_16425 CDS
T11042
Name
(Genbank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl01501
beta-Lactam resistance
spcl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
Chromosome and associated proteins [BR:
spcl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
F9288_16425
Transporters [BR:
spcl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F9288_16425
Antimicrobial resistance genes [BR:
spcl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F9288_16425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QKS02192
UniProt:
A0A6N0X0G6
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All DBs
Position
3403165..3404322
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AA seq
385 aa
AA seq
DB search
MISIALLLAGCGSAGQHGSGGRDRGNGGPVRVGYVVARATSVPISVELPGRTVAFQSSEV
RPQVSGVIQKRFFTEGSIVKQGQPLYQIDPSLYRAAANQASANLASAEASAAAAKTKSDR
YRPLAQIEAVSKQDYTDALAAERQAQASVLQNKAQLDTARINLRFTTVPAPITGRIGRSL
FTVGALVTTSQADPLATIQQLDPIYVDIQQSAAALLALRRGLATGGAVPTRAEVRLKLED
GEEYGLTGSVEFAEAVVDPGTGTITLRARFANPNGLLLPGMFVRAVFNQAIDPRAILVPQ
AAVARDPKGNATVWVVGPGNKAVQKTVTTARVEGANWVVTGGLSVGDRVITQGTAKLQAN
AAIDPVPADAPQRIVPPADQGKKAG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
attatttcgatcgcgctgctgctggcggggtgcggcagcgccgggcagcacgggtccggc
ggcagggatcgcggcaacggcgggccggtgcgcgtcggctatgtcgtcgcccgcgcgacc
agcgtgccgatttcggtcgagcttccgggccgcacggtcgcgttccagagttcggaggtg
cgcccgcaggtcagcggcgtgatccagaagcgattcttcaccgaaggctcgatcgtgaag
cagggccagccgctctaccagatcgatcccagcctctatcgcgcggcggccaatcaggca
tcggccaacctcgccagcgcggaagcgagcgccgccgccgccaagaccaagtccgatcgc
tatcgcccgctcgcccagatcgaggcggtgagcaagcaggactataccgacgcgctcgcc
gccgagcggcaggcgcaggcgtcggtgctccagaacaaggcgcagctcgatacggcgcgg
atcaacctgcgcttcaccaccgttcccgcgccgatcaccgggcggatcgggcggtcgctg
ttcaccgtcggcgcgctcgtcaccaccagccaggccgatccgctcgcgacgatccagcag
ctcgatccgatctatgtcgacatccagcaatcggcggcggcgctgctggcgctgcggcgt
ggcctggcgaccggcggggcggtgccaacgcgggccgaggtacggctgaagctggaggac
ggcgaggaatacggcctcaccggcagcgtcgagttcgccgaggctgtcgtcgatccgggc
accggcacgatcacgctgcgcgcgcgcttcgccaatcccaacgggctgctgctgccgggc
atgttcgtccgcgcggtgttcaaccaggcgatcgacccgcgcgcgatcctcgtgccgcag
gcggcggtggcgcgcgatccgaagggcaacgccaccgtctgggtcgtcgggccgggcaac
aaggcggtgcagaagacggtcacgaccgcgcgggtggagggcgcgaactgggtggttacc
ggcgggctttcggtcggcgatcgcgtcatcacgcagggcaccgcgaagttgcaggccaat
gccgcgatcgacccggtaccagccgatgcgccgcagcgcatcgtcccgcccgcggatcag
ggcaagaaggccggctga
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