KEGG   Sphingomonas sp. CL5.1: F9288_21395
Entry
F9288_21395       CDS       T11042                                 
Name
(Genbank) type IV secretory system conjugative DNA transfer family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
spcl  Sphingomonas sp. CL5.1
Pathway
spcl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:spcl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    F9288_21395
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spcl02044]
    F9288_21395
Enzymes [BR:spcl01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     F9288_21395
Secretion system [BR:spcl02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   F9288_21395
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: QKS02417
UniProt: A0A6N0X6L9
LinkDB
Position
pTSSC1:26831..28789
AA seq 652 aa
MLAATFLACALCAVLVALVGLNQIGPRMQVSAIPGWLWYYRGDPLLHLWLERGALVSGAI
AFVILLIILKRGRTLHGEARFARESEIRREHLRSNSGIIVGQKGGRYLVFGGTEHVLLEA
PTRAGKGVGVVIPNLLSWADSVVVLDVKRENWDITAGFRARHGQAVYLFDPLDPEGRSAR
YNPLSFIDRLDDTDVINELQKIGGMLFPATEKADPFWAEAARAAFVGVGALVAANPALPF
TIGEIYRRLTTGDPKVELPKVVEEAQRRGQRLSQACVSALSDFTSASDNTFSGIKQTITS
KLNLWLNPYVDAATSETDFDLRQIRRERISIYLGVSPDNIDRIAPVYNLFLQQLIDLNTR
ELPENGGRVPVLILLDEFARLGKAPVIASAFSYVAGYGLRLLPVIQSRSQPRSIYGVDVT
DEIIANCGLEIVFTPKELKVANELSERLGFFTMNVKSKSRTIHGLLANRSVSESDQRRAL
MMPQELMQMPKGDLLLMRGGIPPVRGRKIEYFRSKRFTNRISDPPKVAPRPIAINAVSSA
AKLAGGASSSDPLAQALSAKRAALLNDGPETAATEQAQSSARALTDDELSGFAEITDDML
VLGDMVDLPPPGDEQAAIAFVTAMTARAVLEPVGAGAQSPAFVTERHDHGRE
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgctcgcggcaacctttttggcatgtgccttgtgcgcggtgctggtcgcgctcgtcggc
ctcaaccagatcggcccgcgcatgcaggtctcggcgatacccggatggctctggtactat
cgcggcgacccgctgctgcatctgtggctggagcgcggtgcgctggtcagcggcgccatc
gccttcgtcatcctgctcatcatcctgaagcgggggcgcacgctccatggcgaggcacgg
ttcgcgcgcgaaagcgagatccggcgcgaacatctgcgcagcaacagcgggatcatcgtc
gggcagaaaggcggccgctatctggttttcggtggcaccgaacatgtcttgctcgaggcg
ccgacgcgcgccggaaagggcgtcggcgtggtgatccccaatcttctgagttgggcggac
tcggtggtggtgctcgatgtgaagcgcgagaattgggacatcaccgcaggttttcgcgca
cggcatggccaagcggtttatctgttcgatccgctcgatcccgaagggcgaagcgcccgc
tacaatcccttgagcttcatcgaccggctcgacgacaccgatgtgatcaatgaactccag
aagatcggcggcatgttgtttccggctacggaaaaggctgatccgttctgggcggaagcg
gcgcgagccgccttcgtcggcgtcggcgcccttgtcgcggccaatcccgccctccccttc
acgataggcgaaatctatcggcgactgacgacgggcgatccgaaggtcgaactgccgaag
gtcgtcgaagaggcccagcgccgcggccagcggctgagccaggcctgtgtgtcggcgctg
agtgacttcacctccgcgtcggacaacacattttcgggcatcaagcagacgatcacctcg
aagctcaatctctggctcaatccctatgtcgatgccgcgacgtcagagaccgatttcgat
ctgcgccaaatccgccgcgagcggatatcgatctatcttggggtctcgcccgacaatatc
gaccggatcgcgcccgtctataacctcttcctccagcagctgatcgatctcaatacgcga
gaactgcctgagaatggcggccgcgtgccagtgctcattctgctcgacgaattcgcccgc
ctcggcaaggcgccggtcatcgcatcggctttttcctatgttgcaggctacgggcttcgc
ctgttgccagtcatccagagccggtcccagccccgcagtatctatggcgtggacgtcacc
gacgagatcatcgccaactgcggtctggagatcgtattcacacccaaggagctgaaggtc
gccaacgaactgtccgagcggctcggttttttcacgatgaacgtcaaatcgaaaagccgg
acgatccatggcctgctcgccaaccgcagcgtgtcggaatcggaccagcggcgcgcgctg
atgatgccccaggaactgatgcagatgcccaagggagaccttctgctgatgcgcggtggc
attccgcccgtcaggggccgcaagatcgagtatttccgctcgaagcgcttcacgaaccgg
atcagtgacccacccaaggtcgcgccgcgtccgatcgcgatcaacgccgtgtcgtccgcc
gccaaattggcaggcggggcgagcagcagtgatccgttggcgcaggcccttagcgcgaag
cgggctgctctgttgaacgacggtccagagactgcggcaacggagcaggcgcaatccagc
gcgcgcgcgttgaccgatgacgaactgtcgggctttgccgaaatcaccgatgacatgttg
gtgctcggcgacatggtggatctgccaccccccggcgacgaacaggccgctattgccttt
gtcacggcgatgacggcccgggccgttcttgagcccgtgggtgccggcgcccaatctcca
gcatttgtgaccgagaggcatgaccatggcagagagtga

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