Streptococcus pneumoniae D39 (virulent serotype 2): SPD_1135
Help
Entry
SPD_1135 CDS
T00413
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPD_1135 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spd03400
]
SPD_1135 (nth)
Enzymes [BR:
spd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPD_1135 (nth)
DNA repair and recombination proteins [BR:
spd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPD_1135 (nth)
Prokaryotic type
SPD_1135 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
TRAPPC9-Trs120
Motif
Other DBs
NCBI-ProteinID:
ABJ54331
UniProt:
A0A0H2ZMI5
LinkDB
All DBs
Position
complement(1168573..1169202)
Genome browser
AA seq
209 aa
AA seq
DB search
MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAF
PTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVG
RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQ
AMIYFGRAICHPKNPECDQYPQLYDFSNL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgtcaaaaaaacgagcacgaaaggtgctagaagaaatcattgccctcttccca
gatgccaagcctagtcttgattttaccaatcattttgaactcctggttgcggtcatgtta
tcagcccagacgacagatgcagcggtaaataaggccacaccaggtctctttgttgccttt
ccaacaccccaagctatgtctgtagcgacagagagtgagattgcttcacatatttctcgc
ttgggattgtatcggaataaagctaaattccttaaaaaatgtgcccaacagttactagac
gattttgatggtcaagtccctcagacacgtgaagaattggagagtttggcaggtgttggt
cgcaagacagccaatgttgtcatgagtgtaggatttgggattccagcctttgcagtggat
actcatgtggagcgtatttgcaaacaccacgatattgtcaaaaaatcagcgacgccactt
gaggtggaaaagcgggtcatggatatcttgccgcctgagcagtggttagctgcccatcag
gccatgatttattttggaagagccatttgccatccaaaaaatccagagtgtgaccagtac
ccacaattatatgattttagcaatttgtaa
DBGET
integrated database retrieval system
