Sphingopyxis sp. EG6: SPYCW_0477
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Entry
SPYCW_0477 CDS
T10392
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
speg Sphingopyxis sp. EG6
Pathway
speg00020
Citrate cycle (TCA cycle)
speg00785
Lipoic acid metabolism
speg01100
Metabolic pathways
speg01110
Biosynthesis of secondary metabolites
speg01120
Microbial metabolism in diverse environments
speg01200
Carbon metabolism
speg01210
2-Oxocarboxylic acid metabolism
Module
speg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
speg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
speg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPYCW_0477 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SPYCW_0477 (sucA)
Enzymes [BR:
speg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SPYCW_0477 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
Motif
Other DBs
NCBI-ProteinID:
BBB07461
UniProt:
A0A2Z5U9G4
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All DBs
Position
486123..488945
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AA seq
940 aa
AA seq
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MNLERQSFDIDEPQAGPSWAPKNWPQIDSDDLTAALDPQQMQVAVKAAAAKAGAPLSNAE
VERAANDSIRAMMLIRTYRVRGHLAANLDPLGLSTRELPADLTPEYHGFVGADQDRPVYI
GGTLGLEKATIREIVAILRANYCGNVGLEYMHIADLKERQFLQERMEGADKIIEFSVEGK
RAILNKVIEAEEWEKFLAKKYVGTKRFGLDGGESMIPAMEAIIKYGGQYGVKEIVYGMAH
RGRLNMLANVMAKPYKIIFHEFAGGSANPDDIGGSGDVKYHLGTSTDREFGGASVHMSLV
PNPSHLEAVDPVVLGKVRAQQVVRDDLAKHEQVLPVLIHGDAAFAGQGIVWECLGFSGIR
GYNTGGCIHFIVNNQIGFTTSPQYARSSPYPSDVAKGVMAPILHVNGDDPEAVTFACKLA
IDFRQQFKRDVVIDMWCYRRFGHNEGDEPSFTQPLMYERIRKHPPVSQLCAAKLESEGVI
DAGWADARRAEFIARLEDDFEGAKSYKPNKADWFAGRWSGLHAPADPENARRNISTGVSD
KLFDSIGRVLTTVPADVEVHKTLRRVIDARGAMFADKSDKEVFDWATAESLAFGTLLSEG
YQVRLSGQDSGRGTFSQRHAVWVDQKTEAKYVPLTTVPHGRFEVLDSPLSEYGVLGFEYG
YAMADPKSLVLWEAQFGDFANGAQIMIDQFIASGEAKWLRANGLVMLLPHGYEGQGPEHS
SARLERFLQLCAGDNIQVCNISTPSNYFHVLRRQMLRPFRKPLIIMTPKSLLRHKLAVSQ
RSDFIGDAHFRRIMSDRTPPADADIKRVVLCSGKVGYDLMEARDAAGLSDTTVIRIEQLY
PFPGEPLAVRLKRMPKLEEVVWAQEEPRNNGSWFFVEPFIEEALNEAGHKGMRPRYAGRA
AAASPATGLMSRHQTEQSALVADALGLSVRAEIRRSKNKA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgaacgacaaagctttgacatcgatgagccgcaggctggtcccagctgggcg
ccgaagaattggccccagatcgacagcgacgacctgaccgccgcgctcgatccgcagcag
atgcaggtcgcggtcaaggccgccgcagccaaggcgggtgcgccgctgtcgaatgccgaa
gtcgagcgcgccgcgaatgattcgatccgcgcgatgatgctgatccgcacctatcgcgtg
cgcgggcatctggccgccaatctcgatccgctggggctcagcacgcgcgagctgccagcc
gacctgacccccgaatatcatggtttcgtcggcgccgatcaggaccgccccgtctatatc
ggcgggacgctgggtcttgaaaaagcgacgatccgcgagatcgtggcgatcctgcgcgcc
aattattgcggcaatgtcggccttgaatatatgcacatcgccgacctcaaggaacgccag
ttcctgcaggagcggatggaaggcgccgacaagatcatcgaattttcggtcgagggcaaa
cgcgccatcctgaacaaggtgatcgaggccgaggaatgggagaaattcctcgccaagaaa
tatgtcgggaccaagcgtttcggcctcgacggcggcgagagcatgatccccgcgatggaa
gccatcatcaaatatggcggccagtacggcgtgaaggaaatcgtctatggcatggcgcat
cgcgggcgcctcaacatgctcgccaacgtcatggcgaagccgtacaagatcatcttccac
gaatttgccggcggatcggcgaaccccgacgacatcggcggttcgggtgacgtcaaatat
cacctcggcacctcgaccgaccgcgagttcggcggcgcgtcggtgcatatgtcgctggtt
cccaacccttcgcacctcgaagcggtcgacccggtcgtgctcggcaaggtgcgcgcgcag
caggtggtgcgcgacgacctcgccaagcatgagcaggtgctgccggtgctgatccatggc
gacgcggcgttcgcgggacaggggatcgtgtgggaatgcctcggcttctcgggcatccgc
ggctacaacaccggcggctgcatccacttcatcgtcaacaaccagatcggttttacaacc
agcccgcaatatgcgcgctcgtcgccctatccgtcggacgtggcgaagggcgtgatggcg
ccgatcctgcacgtcaacggcgacgatcccgaagccgtgacctttgcgtgcaagcttgcg
atcgattttcgccagcagttcaaacgcgacgtggtcatcgacatgtggtgctatcgccgc
ttcggtcataacgagggcgacgaaccttcgttcacccagcctttgatgtacgagcgcatc
cgcaagcacccgccggtgtcgcagctctgcgccgccaagctggaaagcgaaggcgtgatc
gacgccggttgggccgacgcccgccgcgccgagttcatcgcgcggctcgaagacgatttc
gagggcgccaaaagctacaagccgaacaaggccgactggtttgccgggcgctggtcgggg
ctgcacgctcccgccgatcccgaaaacgcgcgccgcaatatctcgaccggggtcagcgac
aaattgttcgattcgatcgggcgcgtcctgacgaccgtccccgccgacgtcgaagtgcac
aagacgctgcgccgcgtcatcgacgcacgcggcgcaatgtttgccgacaagagcgacaag
gaagtgttcgactgggcgaccgccgaaagcctcgccttcggcaccttgctcagcgaaggc
tatcaggtccgcctgtcagggcaggattcgggccgcggtaccttcagccagcgtcacgcc
gtctgggtcgatcaaaagaccgaggcgaaatacgtgccgctgacgaccgtgccgcacggc
cggttcgaggtgctcgatagtccgctgtccgaatatggcgtgctcggcttcgaatatggc
tatgcgatggccgacccgaaatcgctggtgctttgggaagcgcagttcggcgatttcgcc
aacggcgcgcagatcatgatcgaccagttcatcgcgtcgggcgaggccaagtggctgcgc
gccaacgggctcgtgatgctgctcccgcacggttatgaagggcaggggccggagcatagc
tcggcgcgtctcgaacgcttcctgcagctgtgcgcgggcgacaatatccaggtgtgcaat
atttcgaccccgtcgaactatttccacgtcctgcgccgccagatgctgcgcccgttccgc
aagccgctgatcatcatgacgccgaagtcgctgctccgtcacaagctcgcggtgtcgcag
cgcagcgatttcatcggcgatgcgcatttccgccgcatcatgtccgaccgcaccccgccg
gccgacgccgacatcaagcgcgtggtgctgtgttcgggcaaggtcggttacgacctgatg
gaagcgcgcgatgccgcgggcctttccgacacgacggtgatccggatcgaacagctctat
cccttcccgggcgaaccgctcgcggtgcgcttgaagcggatgccgaagctggaggaggtc
gtctgggcgcaggaagaaccgcgcaacaacggcagctggttcttcgtcgagcctttcatc
gaagaggcgctgaacgaagccggccacaagggcatgcgcccgcgctatgccggacgcgcc
gccgcggcctcgcccgcgacgggcctgatgagccgccaccagaccgagcagtcggcgctg
gtcgccgacgcactgggcctcagcgtccgtgccgaaattcgccgcagcaagaataaagcc
tga
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