Solanum pennellii: 107004557
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Entry
107004557 CDS
T04130
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
spen
Solanum pennellii
Pathway
spen00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107004557
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spen01007
]
107004557
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107004557
Enzymes [BR:
spen01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
107004557
Amino acid related enzymes [BR:
spen01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107004557
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107004557
Prokaryotic type
Other AARSs
107004557
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
107004557
NCBI-ProteinID:
XP_015058285
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All DBs
Position
11:complement(5114624..5132163)
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AA seq
1182 aa
AA seq
DB search
MEDVCEGKDFSFPNQEEKVLQWWEEVKAFENQLEKTKNQPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDEKLQIKTKQQVIEMGIDKYNEE
CRAIVTRYVGEWEKTVVRMGRWIDFQNGYKTMDLKYMESLWWVFAKLHEKGLVYRGFKVM
PYSTGLKTPLSNFEANSNYKEVSDPEIMVSFPIVDDPEGASFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKFNGKIYVVAESRLAELPVEKAKKVAPNGPAADTQIPNSKTKPSGGKSQ
NVETYEVLDKFPGLSLVGKKYIPLFDYFKDFSDSAFRVVADDYVTSDSGTGIVHCAPAFG
EDDYRVCIANNIINKGETLVVAVDDNGRFTDRITDFREKYVKDADNDITQAVKDKGRLVK
SGKFMHSYPFCWRSDTPLIYRAVPSWFIMVEKIKDQLLENNKQTYWVPDFVKEKRFHNWL
ENARDWAVSRSRFWGTPLPVWASEDGVETIVMDSIDKLEKLSGAKVTDLHRHYIDHITIP
SRRGAEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFENNFPGHFVAEGLDQTRGW
FYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPQPSEVINDYGADALRLYL
INSPVVRAEPLRFKKEGVFAVVKDVFLPWYNAYRFLVQNAKRLEIDGFGPFIPSDQKTLQ
SSSNVLDQWINSATQSLVHFVRKEMDAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRT
GEGDCRTALSTLYYVLLTACKAMAPLTPFFTEVLYQNLRKVSKGSEESIHYCSYPTVEGQ
RWERIEQSVNRMMTLIDLARNIRERHNKPLKTPLREMVVVHPDSEFLDDIAGKLREYVLE
ELNIKSLVPCNDTLKYASLRAEPDFSVLGKRLGKSMGVVAKEVKAMSTADIIAFEKAGEL
TIASHTLKLTDIKIVRGFKRPDNRKEDEMDAAGDGDVLVILDLRTDDSLFEAGVAREVVN
RIQKLRKKAALEPTDMVEVFFKSLDNDEKVSKQILESQESYIKDAIGSPLLPAELIPSHA
ITIDEESFHGISNLSFVITLARPSLVFNADAITALYGGNTQYSQGLRTYLLMRDHHNLKS
EFQQGKGKITVKCIENQPPVEVILGKHVFLSVGDHFLNSKSQ
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgtatgtgaaggcaaagatttctctttcccaaatcaagaagaaaaagtcctt
caatggtgggaagaagtcaaagcattcgaaaaccagctcgaaaagacaaaaaatcaaccc
gaatacattttctacgatggtcctccatttgcaacaggtttacctcattacggccacata
ttagcaggtacaatcaaagatattgtgaccaggtatcaatcaatgacgggtcatcatgtg
acccgaagatttgggtgggattgtcatggattaccagttgaacatgaaattgatgagaaa
cttcagattaagactaaacaacaagtgattgaaatggggattgataagtataatgaggaa
tgtagagctattgtgacaaggtatgttggagaatgggaaaaaactgtggtgagaatgggg
agatggattgattttcagaatgggtataagactatggatttgaagtatatggagagtctt
tggtgggtttttgctaagctgcatgaaaagggtcttgtttatagaggcttcaaggttatg
ccttatagtactggtttgaagactccattatccaattttgaagctaattcaaattacaag
gaagtaagcgaccccgaaatcatggtttcattccctatagttgatgatcctgagggtgca
tcctttgttgcatggactactactccttggacccttccaagtaatcttgctctttgtgtg
aacgccaattttgtatacgtcaaggttcgcaataaattcaacgggaagatttatgtagtg
gcggaatctcgattggctgagctaccagttgagaaagccaaaaaggtcgctccaaatgga
cctgctgctgacactcaaatcccaaattctaagacaaagccttctggtggtaaatcacag
aatgtcgaaacttatgaagtgttggataaatttcctgggttgtccctagtggggaagaag
tacattccactattcgattacttcaaggatttttctgattcagcattcagagtcgttgcg
gatgattatgtgacttctgacagtgggactggaattgttcattgtgctcctgcctttggt
gaggatgattatcgtgtttgtatcgcaaacaacataattaataagggggagaccctggtt
gtggcggtcgatgataatggccgctttacggataggattactgatttcagagaaaagtat
gtaaaggatgcagataatgatatcactcaagctgtgaaggataaaggaaggcttgttaaa
tctggaaagttcatgcattcttaccctttttgctggagatctgatacacctctgatttac
agagcagttcctagttggtttattatggttgaaaagattaaggatcaattgctagagaac
aataagcaaacctactgggttcctgattttgtgaaggaaaaacgcttccacaattggtta
gaaaatgctagagactgggctgttagccgaagtaggttctggggtactcctcttcctgtg
tgggctagtgaggatggcgtggaaacaattgttatggactccattgacaaactggaaaag
ctctctggtgctaaggtgacagacttgcatcgtcactacattgatcacattactatccca
tccaggcggggggctgaatttggcgttcttcgacgtgtggaggatgtatttgattgctgg
tttgagagtgggtcaatgccttatgcttatatccactatccttttgagaatgttgagctc
tttgagaacaatttccctggtcattttgtggcagaaggtcttgatcaaactcgtggatgg
ttctacacccttatggtcctttctaccgccctttttgggaaacctgcttttagaaacctc
atttgcaatggtcttgtcctggctgaggatgggaagaagatgagtaaacgattaaagaac
tatcctcaaccatcagaagttatcaatgattatggagctgatgcattgcgtttatatctg
ataaactcccccgttgtccgtgctgaacctctgcgctttaagaaagagggagtttttgct
gtggtgaaagatgttttcttgccatggtacaatgcatataggttccttgttcagaatgca
aaaagacttgaaattgatgggtttggaccattcattccttctgatcagaaaaccttgcag
agttcttcgaatgtcttggaccaatggatcaattctgcaactcagagcttagtgcatttt
gtccggaaggaaatggatgcttatagattgtacacggtggttccatatctcctaaaattt
cttgataatttaacaaatatttatgtgcggttcaatcggaagagactaaaaggccgtact
ggtgaaggagattgcagaactgctctttcaactctttactatgtgctgctgactgcttgt
aaagctatggcaccattaactccttttttcactgaggttctttaccaaaatttgcggaaa
gtttctaaaggatcagaggagagcattcactattgcagctatcctacagtggaagggcag
agatgggagcgtattgagcagagtgttaataggatgatgacccttattgaccttgcacga
aacattcgtgagcgtcacaacaaacctcttaaaactccactcagggaaatggtggttgta
catccagattcagaattccttgatgatattgcgggcaaattaagagagtatgtgctcgag
gagctaaacattaaatctttggtcccatgcaatgacacgttgaagtatgcttctttgcgc
gcagaaccagatttcagtgtgttgggaaaaaggttggggaagtcgatgggtgttgttgcc
aaagaagttaaggccatgtcaaccgcagatataattgcttttgagaaagcaggagaactt
actattgcttcacacactttgaagcttactgatatcaagattgttaggggtttcaaacgt
cctgataacaggaaagaggatgaaatggatgcagcaggggatggtgatgttttagtgata
ctggatttgcgtactgatgattcactctttgaggctggagttgctcgagaggttgtgaat
aggatccagaagctgagaaagaaagcagcgcttgaacccactgacatggtagaggtcttc
ttcaagtctttggataatgatgaaaaagtctctaagcagattttggagtctcaggagtca
tatattaaagacgccattggatctcctttgcttccagctgaactgatcccatcacatgcg
ataactattgatgaagagagtttccatggaatctcaaacttgtcctttgtgatcacctta
gcaagaccaagtctagtgttcaatgcagatgccatcactgctttatacggaggaaacaca
cagtattctcaaggcttacgaacttacctcctgatgagggatcatcataacctcaaatcg
gagtttcaacaaggaaagggaaagataactgtcaagtgcattgaaaatcagcctccagtc
gaggtgattctgggaaaacatgtcttcttgagtgttggagatcatttcttgaatagtaaa
tcgcagtga
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