Solanum pennellii: 107008479
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Entry
107008479 CDS
T04130
Name
(RefSeq) protein SIEL isoform X2
KO
K13141
integrator complex subunit 4
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107008479
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
107008479
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PDS5
HEAT_2
Motif
Other DBs
NCBI-GeneID:
107008479
NCBI-ProteinID:
XP_015063018
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All DBs
Position
1:94069333..94081617
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AA seq
935 aa
AA seq
DB search
MEHLLRSNLETNNNNNPQAILQALSLISNPSNSDSTLSSIAKVLITSLKYPNPKSNSHRF
IHHHILRLFSLLLHRCPHLHHNLISAIREFSLLPSTSTRLLVDALTCLSISDSNVNDEST
FLSLVFRPCVSVRHWLLLNVSKFDIRPSVLLTVLLGFTKDPYPCIRNVALSGLADLCECI
IVEDENLIKGCYFRAVELLFDSEDLVRCSAVHAVSACGQLIVASKQESKGDWSDALFLQL
CSMVRDMSVKVRVEAFKALGKIETVSEYILLQTLSKKASSITKEMNFPGQYSETLFRIPA
ASAVLAFLHGLEDEFDVVRVSACGALQSLAIHSADFSNMVVNLLMGILNDDSMAVKLQAL
DTLHHLTMFRLLKVQQPHLHMFLGILLDSCSLIRCRARKVLKLTELPSLGMFKMCVDGLI
RDLELYPQDEAEVFSALFMIGQNHGEFLVRLINEASQMIEPSSGSKLGYDNVRKASYLVL
ATSAPVSMKQQTCSIPPRMFSYAVTLLGRVSHSFADIVDQRTFLAYLSCCSRFTFVSASE
FFKMEEHRLLPHQNNKMEEHLEEGDVQLTQRREISEYDIWRKLQLKEAESSLLDFQVEHC
KDRNCVNIVLQVVIDIWPSLKLGLINEVTCTLRSLKAELGTRSNHNHRGELVFALQYIDA
LEQLGHLWHHLVFSKEFYFHKWGKLECSLKKLDRCLRDMRYKLIGLTKKDNFLILELIIA
NSILTLCNMEACANTLKKLQSVMSCIEHICGEESTESSNFVVEVQKSLSEIDTSSCSILD
NPYLLLKSLEHFTPRMVVSSGNLKYMEAELQCQGNEFQNPLPFISGLPVGLSLDIKLNNI
SNESRLWIKMSCEASLTQFVFLDLHEIEGDDEVRKFTFVAPFYQTPKANCFSLKICIVLE
CISDSDQLFRGYGGPKHEVVHLCEEKEVYFSVQVR
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccttcttcggagtaatttggagaccaacaataacaacaatcctcaagctatc
ttacaagctctctctctcatctctaacccttccaactctgactccacactttcatccatt
gccaaagtcttaatcacctctctgaaatacccgaatcctaagtctaattcgcatcgtttt
atccaccatcacattctccgcctcttttctcttcttttacatcgctgtccacatctccac
cataacctcatctctgccatccgtgaattctctctcctcccttcaacctccacaagatta
cttgttgatgccctcacatgtctctccatctcagatagtaacgttaatgatgaatcaaca
ttcctctctcttgtttttcgtccttgtgtttctgttcgtcattggttacttttaaatgtg
agtaaatttgacatacggccgtcggttttgcttacggttctgctaggatttacaaaggac
ccctatccgtgtattcgaaatgttgctttgagtggattagctgatttgtgtgagtgcatt
attgtggaagatgaaaatctcataaaaggttgctattttcgagctgttgagcttctgttt
gattctgaggacttggtacgatgttctgcagttcatgcggttagtgcatgcgggcagttg
attgtggcatctaaacaagaaagtaaaggggactggtctgatgcattatttctgcagcta
tgttcaatggtgagagatatgagtgtcaaggtcagggttgaagcttttaaggcccttggg
aagattgaaactgtttctgagtatattctcttacaaacgctatctaagaaagcttcatct
ataacaaaagaaatgaattttcctggccagtactctgagacattgttcaggataccagca
gcgagcgctgttcttgcttttctacatggactggaggatgaatttgatgtggtaagagta
tctgcttgtggagctttgcaatctttagcaatccattctgctgatttttctaatatggtt
gtgaacttgttgatgggcatacttaatgatgattcaatggctgtaaaattgcaagcttta
gatactttgcatcatttgacaatgtttcgccttttgaaggttcaacaaccacatctgcac
atgtttcttgggattctactagacagttgcagcttgataagatgtagagccaggaaggta
ctaaaactgacagaactgccgagcttgggtatgttcaaaatgtgtgttgatggacttata
agagatttggaattgtatcctcaggatgaagccgaagttttttctgctttattcatgatt
ggtcaaaaccacggagagtttttagtcagactgattaatgaagcttcccaaatgatagag
ccctcttctggaagcaagttgggttatgacaatgtgaggaaagcttcatatctagtactc
gccacctctgctccagtatcaatgaagcagcaaacttgcagcattccaccaagaatgttc
tcttatgcagtcacactattagggagagtctctcacagtttcgcagatatagttgaccag
agaacatttttggcttatctttcttgttgcagtagattcacatttgtttctgcatcagag
ttttttaaaatggaagagcatcgtctgttacctcatcaaaacaataaaatggaagagcat
ctggaggaaggtgatgtgcaattgacacaaagacgtgaaatctctgaatacgacatttgg
aggaaattacaactgaaggaagcggaaagctcgcttttggacttccaggttgagcattgt
aaagatagaaattgtgtgaatatcgtccttcaggtggtaatagacatttggccatcactg
aaacttggattgatcaatgaagtaacttgcacactgaggagtttgaaggcagaattggga
acgagatcaaatcacaatcataggggtgagttagtgtttgctttgcaatatatagatgcc
ttggaacaacttggacacttgtggcatcacttggtgttttccaaggagttttacttccat
aaatgggggaaattggagtgttctttgaaaaaactggacagatgcctgagggacatgaga
tataagttaataggtttaaccaaaaaggacaattttcttatcttagagttaataattgca
aacagtatactgacgctttgtaatatggaagcctgtgcgaatactctaaagaagttacag
tctgtcatgtcttgtattgaacatatttgtggagaagaatccactgaatcatccaatttt
gtggttgaagttcagaagtcattgagtgagattgacacctctagttgttcaatcttggac
aatccatatctccttctgaagtctctagagcatttcactccaagaatggtagtttcgtca
gggaatctcaaatatatggaagctgaactgcagtgtcaaggcaatgaatttcaaaatcct
cttcctttcatctctgggctgcctgttggtttatctttagacatcaaactcaataacatc
tcgaacgagagtaggttgtggataaaaatgagttgtgaagcgagtctaactcagtttgtt
ttccttgatttgcatgagatcgaaggagacgatgaagtgaggaaattcacatttgtcgca
cccttctaccaaacccccaaggcaaactgtttctcattgaagatctgtattgttctagag
tgcatatctgacagtgatcagttgttcaggggctatggaggtcctaagcatgaagttgtt
catctttgtgaagaaaaagaagtgtatttttccgttcaagtcaggtaa
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