Solanum pennellii: 107008587
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Entry
107008587 CDS
T04130
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107008587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107008587
03041 Spliceosome [BR:
spen03041
]
107008587
03032 DNA replication proteins [BR:
spen03032
]
107008587
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
107008587
Spliceosome [BR:
spen03041
]
Complex A
U1 snRNP components
Sm proteins
107008587
U2 snRNP components
107008587
Complex B
U1 snRNP components
107008587
U4/U6.U5 tri-snRNP components
107008587
Complex C
U2 snRNP components
107008587
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107008587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107008587
NCBI-ProteinID:
XP_015063176
UniProt:
A0ABM1FXV6
LinkDB
All DBs
Position
1:complement(96222275..96225617)
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AA seq
275 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKEE
REDRRTLGLVLLRGEEVISMTVEGPPPPDESRVKATTAGSAVSGPGIGRAAGRGVPTGPL
VHAQPGLAGPVRGVGGPAPGMMQPQLSRPPMPQVSAPPINYPQQPPPMMRPPGGPPMPPQ
GMQMQRPGGPPPMAPPPQFRPGGGPPQFPPQFGQRPMVPPPPMMRGPPPPRPGMPGQPPH
PGIPPPPPSGQVPVYGPPRPGMPPPPNAPPQNQQQ
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagttccaaaatgcttcaatatatcaattaccgtatgcgtgttaca
atacaggatggtcgtcaattgatcgggaaattcatggctttcgaccggcacatgaatctc
gtgcttggagactgtgaagagttccgtaaacttcctcctacgaaagggtcgaaagaagaa
cgtgaagatcgccgtacacttggtcttgtgcttctccgtggtgaggaggttatttccatg
actgttgagggaccacctcctcctgatgaatcacgagtcaaggctactactgccggttct
gcagtttccggcccgggaattggtcgggctgctggtcgtggtgttcctactgggccgttg
gttcatgctcaaccgggacttgctggacctgttcgtggggttggtgggcctgctccgggt
atgatgcagcctcaactttctcggcctccgatgcctcaagtttctgctccaccgattaat
tacccacagcagccgcctccaatgatgagaccgcctggtgggccaccaatgccaccgcaa
ggtatgcagatgcaaagacctgggggccctccgcctatggcaccaccaccacagttccgg
cctggtggtggtccaccacagtttccaccgcagtttggtcagcgtcccatggttcctcca
cctcccatgatgaggggtccacctcctcctagaccaggaatgcctggtcaaccgcctcac
ccaggtataccacccccacctcccagtggtcaggttcctgtttatggacctcctcgtcct
ggtatgcctccaccgcccaatgctcctccacagaaccagcagcaatag
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integrated database retrieval system
