Solanum pennellii: 107011472
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Entry
107011472 CDS
T04130
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
spen
Solanum pennellii
Pathway
spen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107011472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
107011472
Enzymes [BR:
spen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107011472
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
107011472
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
107011472
NCBI-ProteinID:
XP_015066480
UniProt:
A0ABM1G613
LinkDB
All DBs
Position
1:105343537..105349182
Genome browser
AA seq
688 aa
AA seq
DB search
MAKSEASVGSEDPSSSRPWESYHTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEEK
KEAYTKQKIENMRIQYSKLTAQDISHHQKIADKRILELEATRDLSRIWLHVDMDAFYAAV
ETLCNPSLKGRPMAVGSMSMLSTANYEARKFGVRAAMPGFIARKLCPELLFVPVDFQKYN
HYSNLTRKVFQKYDPNFLAASLDEAYLDITSVCKERGITSGEVAKELRESVHLETGLTCS
AGVAPNRLLAKVCSDINKPNGQFVLPNDRSAVVTFISSLPIRKIGGIGKVTERILKDVFG
IATCEEMLQKSSSLCGLFSRSSADFFLSVGLGLGGTDTPQYRMRKSISNERTFSATSDEA
LLFQKLVDLSEMLSADMIKEGLFGRTLTLKLKTASFEIRSRAVTLPSYISSSEEILKHAS
KLLKAEFPVSLRLMGLRMSHFSEDKNGIPPDPTQKTLSSFIFSGDASGGKTSDYRPLVSN
VCDNTFSVDENCCPTYCPETSCDLRVSSMENQASDSTYSCHAIGNINEEFNETLIPQSSE
PQPKVHEPTDTDHTIKSDKVDSYVRQLEASSCDRWEVGVNCANDEAGSASDQMQLFLWVD
DYKCSICGIELPPSFIEERQEHSDFHLAEKLQGEESGNHHRSFMPQQRAAQRGHTGSSSR
QKKKQKPSPTASKYVPIDAFFVKTNQNF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagagcgaagcttcagtagggagcgaagatccgtcttcttctcgcccatgggaa
tcttatcacacagtcttcaccaatgccaaagcaggaatggaaggagtggacaaggaaaaa
gtacagaggatagtgtatgaaatgagtaaagggtccaagtattttgagaatgaggaaaag
aaggaagcttatacgaagcagaaaatcgagaacatgcgtattcagtactccaaactcact
gcacaagatatatctcatcatcagaagattgctgacaaaaggattttagagctagaagcc
acacgtgatttgtcaaggatctggctacatgtggatatggatgctttttatgcagctgtt
gaaaccttgtgtaatccttcattgaaaggcaggcctatggctgttggcagcatgtccatg
ctttccacagcgaactatgaggcccggaaatttggtgttcgagctgcgatgcctggattc
attgcacgtaaactatgtccagagttgttatttgtccctgtagactttcagaaatataat
cattacagcaacttaacaagaaaagtttttcagaaatatgatccgaactttttggctgcc
agcttggatgaggcatacctagatattactagtgtttgcaaagagaggggcattacgagt
ggagaagtagctaaagagcttagagaaagtgtacaccttgagacaggtctaacgtgcagt
gctggagttgcaccaaaccgcttacttgctaaggtttgttcagatatcaacaaaccaaat
ggccagtttgttttgccaaatgatcgaagtgctgttgtgacatttatttcttcacttcca
ataaggaagattgggggcattggtaaggtcactgaacgtatcttaaaggatgtctttgga
atagcaacctgtgaggagatgctgcaaaagagtagttccctttgtggcctgttttctcgt
tcttcagcagactttttcctttccgtaggtctagggcttggtggaaccgatactcctcaa
tataggatgagaaagagtataagtaacgaaagaacattttcagccactagcgacgaagct
ttgctttttcaaaaattagttgatctatcagaaatgctttctgctgatatgataaaggaa
ggtctttttgggcgaacattgacactaaaactgaagaccgcatcctttgagattcgatct
cgagcggtgactttgccaagttacataagttcaagtgaggaaatcttgaaacatgcttca
aagctgcttaaggccgaatttcctgtttctttgaggctcatgggtcttcgaatgtctcat
ttcagtgaagacaagaacgggattccacctgatcctacacaaaaaactctttctagtttc
attttttctggagatgcttctggaggaaagactagtgattacaggcccttggtctctaat
gtttgtgataatactttctcagttgatgagaattgttgtcctacctactgccctgagaca
tcttgtgatctgcgtgtctcttcaatggagaaccaggcatcagattctacttacagttgc
catgcaatagggaacattaatgaagaatttaatgaaactcttatacctcaaagtagtgaa
cctcaacctaaggttcatgaaccaaccgatactgatcatacaataaagtctgataaggtc
gattcttatgtgagacaattggaggcaagcagctgtgatagatgggaagttggtgttaac
tgcgcgaatgatgaagcaggctctgcatcagatcagatgcaattatttctttgggtggac
gactacaaatgctctatttgtggtattgaactgcctccaagtttcattgaagaaaggcaa
gaacattctgattttcatcttgctgaaaagttgcaaggtgaagaatcaggtaaccaccac
agaagttttatgccacaacagagggctgcccagagaggccatactggaagcagcagtcgg
cagaaaaagaaacagaaaccctctccaactgctagcaaatatgtaccaattgacgcattc
tttgttaaaacaaaccagaatttttga
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