Solanum pennellii: 107020988
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Entry
107020988 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase MIEL1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107020988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107020988
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107020988
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107020988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
DUF8562
Motif
Other DBs
NCBI-GeneID:
107020988
NCBI-ProteinID:
XP_015077035
UniProt:
A0ABM1GWN1
LinkDB
All DBs
Position
6:complement(47030337..47034928)
Genome browser
AA seq
267 aa
AA seq
DB search
MEGSCNERLYFGKMGYGCEHYRRRCRIRAPCCNEVFDCRHCHNEATSLLRNIYDRHELVR
HDVKQVICSVCDTEQPAAHVCTNCGVNMGEYFCEVCKFYDDDTDKEQFHCDDCGICRVGG
RQNFFHCKKCGSCYSVNLRNNHSCVENSMRHHCPICYEYLFDSLKDTTVMKCGHTMHTEC
YHEMIKRDKCCCPICSKSIIDMSRVWRRMDEEIEETIMPEDLRDKKVWILCNDCNDTTEV
FFHIIGQKCRHCESYNTRMIASPVLPQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctcctgcaatgaacgcctttattttggcaaaatgggttatggatgcgagcac
tataggagaagatgcaggattagggcgccttgctgtaatgaggtctttgattgtcgtcat
tgtcacaatgaagcaacgagcttgttgcgcaatatatatgatcggcatgaactggttcga
catgatgtaaagcaggtcatttgctcagtttgtgatacagaacagccagctgctcatgtt
tgtacaaattgtggtgtaaatatgggagaatacttctgtgaagtgtgcaaattctatgac
gatgatacagacaaagagcagtttcattgtgatgattgtggaatctgcagagtcggtggc
cgtcagaacttttttcactgcaagaagtgtggctcttgctattcagttaatttacgtaat
aaccactcgtgtgtggagaactccatgcggcatcattgtcccatttgttatgagtatctc
tttgattctcttaaagacacaacagtaatgaaatgtggtcacacaatgcacactgagtgc
taccacgagatgataaagcgtgacaaatgctgctgccccatatgttccaaatcaatcata
gatatgtcgagagtttggagaagaatggatgaggagattgaagaaacaatcatgcctgaa
gatctccgagacaagaaggtttggattctatgtaatgactgtaatgatacaaccgaagta
ttcttccacattatcgggcagaaatgccgacactgtgaatcatacaacacccgcatgatt
gcatctccagttcttcctcaataa
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