Streptomyces peucetius subsp. caesius: CGZ69_25480
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Entry
CGZ69_25480 CDS
T07792
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
speu
Streptomyces peucetius subsp. caesius
Pathway
speu03030
DNA replication
speu03410
Base excision repair
speu03420
Nucleotide excision repair
speu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
speu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGZ69_25480
03410 Base excision repair
CGZ69_25480
03420 Nucleotide excision repair
CGZ69_25480
03430 Mismatch repair
CGZ69_25480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
speu03032
]
CGZ69_25480
03400 DNA repair and recombination proteins [BR:
speu03400
]
CGZ69_25480
Enzymes [BR:
speu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CGZ69_25480
DNA replication proteins [BR:
speu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGZ69_25480
DNA repair and recombination proteins [BR:
speu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CGZ69_25480
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGZ69_25480
MMR (mismatch excision repair)
DNA ligase
CGZ69_25480
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CGZ69_25480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
HHH
DUF8512
ILEI
PGRL1_N
Motif
Other DBs
NCBI-ProteinID:
ATW52841
LinkDB
All DBs
Position
5535555..5537735
Genome browser
AA seq
726 aa
AA seq
DB search
MAGEQQTTLPAEAREQHALLAEQIEEHRFRYYVKDSPVISDAEFDKLLRELEGLEERYPE
LRTPDSPTQKVAGNYETELSKVEHRERMLSLDNAFDDAELAAWADRVAREVGASGYHFLC
ELKVDGLAVNLTYEKGRLTRAATRGDGRVGEDITPNVRTIAGIPDRLAGDRIPDLVEIRG
EVYFPMEQFQDLNARRVAAGEQPYANPRNSASGSLRQKDPKVTAKLPLHMVVHGIGARRG
LTIDRLSQAYELLREWGLPTAQHNKVVGSLDEVREFITYFGEHRHSVEHEIDGVVVKLDE
IPLQGRLGSTARAPRWAIAWKYAPEEVNTKLINIRVGVGRTGRVTPYAQVEPVTVAGSEV
EFATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGSEREFVMPAECPECGT
ALRAMKEGDIDLRCPNARSCPAQLRERVSYLAGRECLDIDHFGEVVAAALTRPLEPAEPP
LTDEGDLFDLTIDRLLPIKAYVLDQDSGLPKRDPKTGEEKVATVFANQKGEPKKNALAML
AGIEAAKQAPLARIINGLSIRHVGPVAAQALAREFRSVERIEQATEEELAATDGVGPIIA
AALKQWFAEDWHREILRKWRAAGVRMEEEAGQDEGPRPLEGLTVVVTGTLENHTRDGAKE
ALQSLGAKVAGSVSKKTSFVVVGDNPGSKYDKAVQLKVPVLDETGFAVLLEQGPDAAREA
AVAQEA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtggccggcgaacagcagacgaccctgcccgcggaagcacgggagcagcacgcgctcctc
gccgagcagatcgaggagcaccgcttccggtactacgtgaaggacagtcccgtcatctcc
gacgcggagttcgacaagctgctgcgcgagctcgaagggctcgaggagcgctatccggag
ctgcggactcccgactcacccacccagaaggtcgccggcaactacgagacggagctgtcc
aaggtcgagcaccgcgagcggatgctctccctcgacaacgcgttcgacgacgcggagctc
gccgcctgggcggatcgcgtcgcccgcgaggtcggcgcctccgggtaccacttcctgtgc
gagctcaaggtcgacggtctcgcggtcaacctgacgtacgagaagggcaggctgactcgc
gccgccacccgcggcgacggccgggtcggcgaggacatcactccgaacgtgcgcaccatc
gccggcatccccgaccggctggcgggcgaccgtatcccggacctcgtggagatccgcggc
gaggtctacttccccatggagcagttccaggatctcaacgcccgccgtgtggcggccggc
gaacagccgtacgccaacccgcggaactccgcctccggttcgctgcgccagaaggatccc
aaggtcaccgccaagctgccgctgcacatggtcgtgcacggcatcggcgcccgccggggc
ctgaccatcgaccgcctctcgcaggcgtacgagctgctgcgcgaatggggcctgccgacc
gcgcagcacaacaaggtggtcggatcgctggacgaggtgcgcgagttcatcacctacttc
ggtgagcaccgccactccgtcgagcacgagatcgacggcgtcgtcgtcaagctcgacgag
atcccgctgcagggccgtctcggctccaccgcgcgggccccgcgctgggcgatcgcctgg
aagtacgcgccggaggaggtcaacaccaagctgatcaacatccgcgtcggcgtcggccgc
acgggccgagtcacgccgtacgcgcaggtcgagccggtgacggtggccggctccgaggtg
gagttcgccaccctgcacaaccaggacgtggtcaaggccaagggcgtcctcatcggcgac
accgtggtgctgcgcaaggccggcgacgtcattccggagatcctcggcccggtggtcgac
ctgcgggacggcagcgagcgggagttcgtcatgcccgccgagtgcccggagtgcgggacg
gcgctgcgcgccatgaaggagggggacatcgatctgcggtgccccaacgcccgttcgtgc
ccggcgcagctgcgggagcgggtctcctatctcgcaggccgggagtgcctggacatcgac
cacttcggtgaggtggtcgccgccgcactgacccggccgctggagccggccgagccgccg
ctgacggacgagggcgacctgttcgacctgaccatcgaccggctgctgcccatcaaggcg
tacgtcctcgaccaggacagcgggctgcccaagcgcgacccgaagaccggcgaggagaag
gtcgccacggtcttcgccaaccagaagggcgagccgaagaagaacgcgctggcgatgctc
gccggcatcgaggccgccaagcaggcacccctggcccggatcatcaacggcctgtccatc
cgtcatgtcgggcctgtcgccgcccaggcactcgcccgtgagttccgctccgtcgagcgg
atcgagcaggcgacggaggaggagctggcggccaccgacggcgtgggcccgatcatcgcc
gccgcgctcaagcagtggttcgcggaggactggcaccgggagatcctgcgcaagtggcgt
gcggccggtgtccggatggaggaggaggcgggtcaggacgaggggccccggccgctcgaa
ggactgaccgtcgtcgtcaccgggacgctggagaaccacaccagggatggcgcaaaagaa
gcgctccagagcctcggagcgaaagtggccggttccgtatcgaagaagacgagcttcgtc
gtggtcggcgacaaccccggttccaagtacgacaaggctgtgcagttgaaggtgccggtc
ttggacgagacgggcttcgcggttctcctcgaacaggggcccgacgcggctcgtgaggcg
gctgtggctcaggaggcatga
DBGET
integrated database retrieval system
