Sphingopyxis sp. FD7: SPYCA_0191
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Entry
SPYCA_0191 CDS
T10393
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
spfd Sphingopyxis sp. FD7
Pathway
spfd00270
Cysteine and methionine metabolism
spfd00450
Selenocompound metabolism
spfd00670
One carbon pool by folate
spfd01100
Metabolic pathways
spfd01110
Biosynthesis of secondary metabolites
spfd01230
Biosynthesis of amino acids
spfd04980
Cobalamin transport and metabolism
spfd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SPYCA_0191 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SPYCA_0191 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SPYCA_0191 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SPYCA_0191 (metH)
04980 Cobalamin transport and metabolism
SPYCA_0191 (metH)
Enzymes [BR:
spfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
SPYCA_0191 (metH)
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GFIT
Motif
Pfam:
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
FumaraseC_C
ArsA_HSP20
Motif
Other DBs
NCBI-ProteinID:
BBB10933
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Position
200874..203495
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AA seq
873 aa
AA seq
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MTETNASSTFVNIGERTNVTGSAAFKRLVLAGDYAAAVEVARQQVENGAQVIDVNMDEGL
LDAEHAMTTFLKLIAAEPDIARVPVMIDSSKWSVIEAGLKCVPGKPIVNSISMKEGEAQF
LDHAKKCMAYGAAVVVMAFDEVGQADTKDRKVEICERAYKLLMSIGFPPEDIIFDPNIFA
VATGIEEHDNYAVDFIEAVKEIRVRCPHAHFSGGLSNLSFSFRGNETVRRAMHSVFLYHA
IPAGLDMAIVNAGQLDVYDTIDPELRNACEDVILNRKVEGEAESPTERLIALAERYKGTN
AAQEKAAEEWRGWPVAKRLEHALVKGIDAHIVEDTEEMRLAMDRPIDVIEGPLMDGMNVV
GDLFGSGKMFLPQVVKSARVMKKAVAHLLPFIEAAKEPGAKGKGKVVMATVKGDVHDIGK
NIVGVVLQCNGFEIVDLGVMVPWTRILEAANENDADMIGLSGLITPSLDEMVTVAEEMQR
AGMTMPLLIGGATTSKVHTALRIDPAYEGPVLHVLDASRAVGVATALVSDTGRDDYVKGY
KDDYAHVRDVRAGKGQSVLHTIEEARANYYDAYLSDKPAPPLEPGLHRFDDWSLEDLRDY
IDWTPFFRAWELHGTWPSILDDEVVGETAQALKVDADAMLDRIIGEKWLTARGVCALWPC
ARHGDDVVIHLAEEERHVTLPFLRQQIKKSRDRANMCLADFIDPAGDWIGGFAVGIHGIE
PHSERFRADKDDYSDILLKALADRFAEAFAERLHQHVRTTLWGYAPGEQLTNEALIREEY
RGIRPAPGYPACPDHSLKPILFDLLDAGENAGLVLTESFAMLPTAAVSGFYFGHPESQYF
GVARIGSDQLEDYARRRGVNLETARRWLRPNLD
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaccaacgcctcctccaccttcgtcaatatcggcgaacgcaccaatgtcacg
ggctcggccgcgttcaagaggctcgtcctcgcgggcgattatgccgcggcggtcgaggtc
gcgcgccagcaggtcgaaaatggcgcgcaggtgatcgacgtcaacatggacgaagggctg
ctcgacgccgaacatgcgatgacgacctttttgaagctcatcgccgccgagccggacatc
gcgcgcgtgccggtgatgatcgacagctcgaaatggagcgtgatcgaggcgggcctcaaa
tgcgttccgggcaagccgatcgtcaattcgatcagcatgaaggaaggcgaggcgcagttc
ctcgatcatgcgaagaagtgcatggcctatggcgccgcggtcgtcgtgatggcgttcgac
gaggtcggacaggccgataccaaagaccgcaaggtcgagatttgcgagcgcgcctacaag
ctgctcatgtccatcggtttcccgcccgaggacatcatcttcgaccccaatatcttcgcg
gtcgcgacggggatcgaagagcatgacaattatgcggtcgatttcatcgaagcggtaaag
gaaatccgcgtccgctgtccgcacgcgcatttttcgggcggcctgtccaatctgtcgttc
agctttcgcggcaacgagacggtgcgccgcgcgatgcacagcgtctttctttatcacgcc
atcccggcgggactcgacatggcgatcgtcaacgcggggcagctcgacgtctatgacacc
atcgaccccgaattgcggaacgcctgcgaggatgtcatcctcaatcgcaaggtcgaggga
gaggccgaaagcccgaccgaacggctgatcgcgctcgccgaacgctataagggaacgaat
gccgcgcaggaaaaggcggccgaggaatggcgcggctggccggtcgccaagcgcctcgaa
catgcgctggtcaaggggattgacgcgcatatcgtcgaggacaccgaagagatgcgcctc
gccatggaccgcccgatcgacgtgatcgaagggccgctcatggacgggatgaacgtcgtc
ggcgacctgttcgggtcaggcaagatgttcctgccgcaggtggtcaaatcggcgcgcgtg
atgaaaaaggcggtcgcgcacctgctgccctttatcgaggcggcgaaggagccgggcgcg
aagggcaagggcaaggtcgtgatggcgaccgtcaagggcgacgtccacgacatcggcaag
aatatcgtcggcgtcgtgctccagtgcaacggcttcgagatcgtcgacctgggcgtgatg
gtgccgtggaccaggatattggaggcggcgaacgagaatgacgccgacatgatcggcctc
agcggcctcatcaccccttcgctcgacgagatggtgacggtggccgaggaaatgcagcgc
gcgggaatgacgatgccgctgctgatcggcggcgcgacgacctcgaaagtccacaccgcg
ctgcgcatcgaccctgcctatgaggggccggtgctccacgtcctcgacgcgagccgcgcg
gtcggggtcgcgaccgcgctggtcagcgacacgggccgcgatgactatgtgaaagggtat
aaggacgattatgcccatgtccgcgacgtgcgcgcgggcaaggggcaaagcgtcctccac
acgatcgaggaagcgcgcgccaattattacgacgcctatttgagcgacaagcccgcgccg
ccgcttgagcccggcttgcaccgcttcgacgactggtcgcttgaagatctccgcgactat
atcgactggacgccctttttccgcgcctgggaattgcacggcacctggccgtcgatcctc
gacgacgaggtggtcggcgaaaccgcccaggcgctcaaggtcgatgccgatgcgatgctc
gaccgcatcattggcgaaaaatggctgaccgcgcgcggcgtctgcgccctttggccgtgc
gcgcggcacggcgacgatgtcgtcatccacctcgccgaggaggagcgtcatgtcacgctc
cccttcctgcgccaacagatcaagaaaagccgcgaccgcgcgaatatgtgtctcgccgat
ttcatcgacccggcgggagactggatcggcggctttgcggtcggcatccacgggatcgag
ccgcattcggagcggttccgtgctgacaaggatgattattcggacattttgctgaaagca
ctcgccgaccgtttcgccgaagcctttgccgagcggctgcaccagcatgtccgcacgacg
ctgtggggctatgcgccgggggagcagctgaccaacgaggcgctgatcagggaggaatat
cgcggcatccgtccggcgccgggctatccggcctgtcccgatcacagtttgaaaccgatc
ctgttcgacctgcttgacgccggcgagaatgccgggctggtactgaccgaaagttttgcg
atgctgccgaccgcggcggtcagcggcttttatttcggccatcccgaaagccagtatttc
ggcgtcgcgcggatcggcagcgaccagctcgaggattatgcgcggcggcgcggggtcaac
ctggagactgcgaggcgctggttgcggccgaatctggattaa
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