Sphingomonas paeninsulae: D3Y57_01635
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Entry
D3Y57_01635 CDS
T05706
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spha
Sphingomonas paeninsulae
Pathway
spha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D3Y57_01635 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spha03400
]
D3Y57_01635 (nth)
Enzymes [BR:
spha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D3Y57_01635 (nth)
DNA repair and recombination proteins [BR:
spha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D3Y57_01635 (nth)
Prokaryotic type
D3Y57_01635 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF2400
Motif
Other DBs
NCBI-ProteinID:
AYJ85434
UniProt:
A0A494TDT8
LinkDB
All DBs
Position
unnamed1:103181..103843
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AA seq
220 aa
AA seq
DB search
MKKADIFEFYRRLAELNPSPETELESVNIYTLLVAVVLSAQSTDAGVNKATRALFATVRD
PQAMVELGEAGLKSHIKTIGLFNTKARNVIALSHLLIDKFGGEVPTDRDALETLPGVGRK
TANVVLNVALGAETFPVDTHVFRVANRTGLAKGKTVMAVETILERQTPQPFRTHAHHWLI
LHGRYTCKARTPECWRCPVIDLCAFRPKSLPPAKIPASIR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaggccgatattttcgagttttatcggcggttggccgaactaaacccatcaccc
gaaaccgagcttgaatcagtcaatatctacacgttgttggtagccgtcgtgctgtcggca
caatcgaccgacgctggggttaacaaggcaacacgcgcgctgttcgccaccgtccgcgat
ccgcaggcgatggtcgaactgggcgaagcaggcctgaagtctcacatcaagacgatcggc
ctgttcaataccaaggccaggaacgttatcgccctgtcgcacctcttgatcgacaaattc
gggggcgaggttccaaccgatcgcgatgcgctggaaactttgccaggagtggggcgcaaa
accgcaaacgtcgtgctgaacgtcgcgctcggcgcagaaacatttcccgtcgacacccat
gtgtttcgtgtcgccaaccgcaccggccttgcgaagggcaagacggtaatggcggttgaa
acgatcctagaacgccagactccacagccctttcgcacccacgcgcaccactggctgatc
ctgcatggacgttatacctgtaaagcgcggacgcccgaatgctggcgttgtcccgttatc
gatctttgtgcgttcaggcctaagtcattgccacctgctaagatacctgcatcgatccgc
taa
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