KEGG   Sphingobium sp. EP60837: EP837_04025
Entry
EP837_04025       CDS       T04432                                 
Name
(GenBank) Protein virD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
sphb  Sphingobium sp. EP60837
Pathway
sphb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EP837_04025
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphb02044]
    EP837_04025
Enzymes [BR:sphb01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     EP837_04025
Secretion system [BR:sphb02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   EP837_04025
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ANI80403
UniProt: A0A173L588
LinkDB
Position
pEP2:65836..67848
AA seq 670 aa
MIRLSDARPLTKVAIVAVMLAATILACALCAVLVALVGLNQIGPHMQISAIPAWLWYYRG
DPLLHLWLERGALVSGAIAFVILLVILKQGRSLHGEARFAHESEIRREHLRSNSGIIVGQ
KGGRYLLFGGTEHVLLEAPTRAGKGVGVVIPNLLSWADSVVVLDVKRENWDITAGFRARH
GQAVYLFDPLDPEGRSARYNPLSFIDRLDDTDVINELQKIGGMLFPAPEKADPFWAEAAR
AAFVGVGALVAANPALPFTIGEIYRRLTTGDPKIELPKVVEEAQKRGQRLSQACVSALSD
FTSASDNTFSGIKQTITSKLNLWLNPYVDAATSETDFDLRQVRRERISIYLGVSPDNIDR
IAPVYNLFLQQLIDLNTRELPENGGRVPVLILLDEFARLGKAPVIASAFSYVAGYGLRLL
PVIQSRSQPRGIYGADVTDEIIANCGLEVVFTPKELKVANELSERLGFFTMNVKSKSRTI
HGLLANRSVSESDQRRALMMPQELMQMPKSDLLLMRGGIPPVRGRKIEYFRSKRFTSRIS
DPPKVAPRPIAINAVSSAAKLAGEANTRDPLAQALSAKKAVLLSDGEATAPAERADPVMR
ALTGDELAGFAEITDDMLVLGDMVDLPPPGDEKAAIAFVTAMTARAVLDPVGAGAQSPEF
ATERHDHGKE
NT seq 2013 nt   +upstreamnt  +downstreamnt
ttgatccggctgtcggacgcacgaccgctcactaaggttgcgattgtcgcggtgatgctc
gcggcgaccattttggcatgcgccctgtgcgcggtgctggtcgcactggtcggcctgaac
cagatcggcccgcacatgcagatctcggcgatacccgcctggctctggtattatcgcggc
gatccgctgcttcatctgtggctggagcgcggtgcgttggtcagcggcgccatcgctttc
gtcatcctgctcgtcatcctgaagcaagggcgctcgctccacggcgaggccaggttcgcg
catgaaagcgaaatccggcgcgaacatctgcgcagcaacagtgggatcatcgtcgggcag
aaaggcgggcgctatctccttttcggcggcaccgaacatgtcttgctcgaggcgccgacg
cgcgccggcaaaggcgtcggggtggtgatccccaatctgctgagctgggcagactcggtg
gtggtgctcgacgtgaagcgcgagaattgggacatcaccgcgggttttcgcgcgcggcat
ggccaggcggtctatctgttcgatccgctcgatcccgaagggcgaagcgcccgctacaat
ccgttgagctttatcgaccggctcgacgacaccgatgtgatcaacgagctccagaagatc
ggcggcatgctgttcccggcccctgaaaaggccgacccgttctgggcggaagcggcgcgc
gcggcctttgttggtgtcggcgcccttgtcgcggccaatcccgccctccccttcacgatt
ggcgaaatctatcggcgactgacgacgggcgatcccaagatcgaactcccgaaggtcgtc
gaagaggcgcagaagcgcgggcaacggctgagccaggcctgcgtatcggcgttgagcgac
ttcacctccgcgtcagataacaccttctccggtatcaaacagacgatcacatcgaagctc
aatctgtggctcaacccctatgtcgatgcggcgacgtcggagaccgatttcgatctgcgt
caggtccggcgtgagcggatatcgatctatcttggggtgtcaccggacaatatcgaccgc
atcgcaccggtctataatctcttcctccagcagctgatcgatctcaatacgcgggaactg
cccgagaatggcggccgcgtgccggtgctcattctgctcgacgagttcgcccgcctcggc
aaggcgccggttatcgcgtcagctttttcctacgtggcaggctacggacttcgcctgttg
cccgtcatccagagccggtcccagccccgcggtatctatggcgcggacgttaccgacgag
atcatcgccaattgcggactggaggtcgtattcactcccaaggagctgaaggtcgccaac
gaactctccgagcggctcggcttcttcacgatgaacgtcaaatcgaagagccgcaccatt
catggcctgctcgccaaccgcagcgtatcggagtcggaccagcgccgcgcgctgatgatg
ccccaggaactgatgcagatgcccaagagcgaccttctgctgatgcgcggcggcattccg
cccgtcaggggccgcaagatcgagtatttccgctccaagcgcttcacgagccggatcagt
gacccgcccaaagtcgcgccccgtccgatcgcgatcaacgcagtgtcgtccgccgccaaa
ttggcaggcgaggcgaacacccgtgatccgttggcgcaagcccttagtgcgaaaaaggct
gttttgttgagcgacggtgaggcgaccgcgccggcagagcgggcggatcctgttatgcgc
gcgctcactggtgacgagttggcgggctttgccgaaatcaccgatgacatgttggtactc
ggcgacatggtggatctaccaccgcccggcgacgaaaaggcggctattgcctttgtcacg
gcgatgacggcccgggccgttctcgatcccgtgggtgccggtgcccaatctccagaattt
gcgaccgagaggcatgaccatggcaaagaatga

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