Rhizorhabdus wittichii DC-6: HY78_01310
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Entry
HY78_01310 CDS
T05200
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd01501
beta-Lactam resistance
sphd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HY78_01310
01503 Cationic antimicrobial peptide (CAMP) resistance
HY78_01310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sphd03036
]
HY78_01310
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_01310
01504 Antimicrobial resistance genes [BR:
sphd01504
]
HY78_01310
Chromosome and associated proteins [BR:
sphd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HY78_01310
Transporters [BR:
sphd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HY78_01310
Antimicrobial resistance genes [BR:
sphd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HY78_01310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl
Biotin_lipoyl_2
DUF748
Motif
Other DBs
NCBI-ProteinID:
ARR52193
LinkDB
All DBs
Position
239585..240766
Genome browser
AA seq
393 aa
AA seq
DB search
MGMNVESGIQTDYAAYDYDDGQARRRRRIIIGGVIAAVVVVVVAGVMIFGGNKAAPPAPP
APGVTVIVPGLTDVAATISSTGTLFAKREMPVGIAGEGGMVQAVLVEPGTWVAAGQTLAV
IERSVQAQQANSLSASVRVARADAELAQAELDRAKALVARGFISKADIDRRTATRDAAVA
RVAVAQAQLGEQRAQIGRLDIRSPAAGLVLTRAVEPGQVVNASNGALFRVAKGGEMEIRA
QLVERDLARLKVGDTAQVTPIGTRKTFTGTIWQLSPVIDPQTRQGVARIQLAYDPALRPG
GFATATISSGRVTAPRLPESAVLSDDKGSFVYSVGKDGKVVRHDVKVGDFSDAGIVILSG
LRGDEKVVLSAGAFLNPGDKVTPQLAKPDALAH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaacgtcgaatccggcatccagaccgactatgcggcctatgactatgacgac
ggccaggcgcgccgccgccgccggatcatcatcggcggggtgatcgccgccgtggtcgtg
gtcgtggtcgcgggggtgatgatcttcggcggcaacaaggccgcaccgcccgccccgccc
gcccccggcgtcaccgtgatcgtgcccggcctgaccgacgtcgccgcgacgatctcgtcg
accggcacgctgttcgccaagcgcgagatgccggtcggcatcgccggcgagggcggcatg
gtgcaggcggtcctggtcgaacccggcacctgggtcgccgccggccagacgctggcggtg
atcgagcgctcggtccaggcgcagcaggccaattcgctctccgcctcggtccgggtcgcc
cgcgccgacgccgagcttgcccaggccgaactcgaccgcgccaaggcgctggtcgcgcgc
ggcttcatctccaaggccgacatcgaccgccgcaccgcgacgcgcgacgccgccgtcgcg
cgggtcgcggtcgcgcaggcccagctcggcgagcagcgcgcccagatcggccgcctcgac
atccgctcgcccgccgccggcctggtgctgacccgcgcggtcgagcccggccaggtcgtc
aatgccagcaacggcgcgctgttccgcgtcgccaagggcggcgagatggagatccgcgcc
cagctcgtcgagcgcgacctcgcccgcctcaaggtcggcgacaccgcgcaggtgacgccg
atcggcacccgcaagaccttcaccggcacgatctggcagctttccccggtgatcgacccg
cagacccgccagggcgtcgcccgcatccagctcgcctatgatccggcgctgcggcccggc
ggcttcgccaccgcgacgatcagcagcggccgcgtcaccgcgccgcgcctgcccgaatcc
gcggtgctgagcgacgacaaggggtcgttcgtctacagcgtcggcaaggacggcaaggtg
gtccgccacgacgtgaaggtcggcgacttctccgacgcgggcatcgtcatcctctccggc
ctgcgcggcgacgagaaggtggtgctgtcggccggcgccttcctgaaccccggtgacaag
gtgacgccgcagctcgccaagcccgacgccctcgcgcactga
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