Rhizorhabdus wittichii DC-6: HY78_01885
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Entry
HY78_01885 CDS
T05200
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd01501
beta-Lactam resistance
sphd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HY78_01885
01503 Cationic antimicrobial peptide (CAMP) resistance
HY78_01885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_01885
01504 Antimicrobial resistance genes [BR:
sphd01504
]
HY78_01885
Transporters [BR:
sphd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HY78_01885
Antimicrobial resistance genes [BR:
sphd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HY78_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
ARR52293
LinkDB
All DBs
Position
complement(366233..369427)
Genome browser
AA seq
1064 aa
AA seq
DB search
MIGIVKVALHRPLTFIVMAILIAIGGTLAALRTPVDIFPNIRIPVIAVAWQYAGLPPQDM
ADRVIGPYERVLTTTVNDIDHIESQSLLGVGIVKIYFQPGADIRTATAQVTSISQTVLRQ
MPPGTTPPLILNYNASTVPILQLALSGKGLSEQQLFDIGQNQIRPQLVTVPGLAMPFPSG
GKQRQVQIDLNPLALQSKGLSAQDVGAAIAAQNQINPAGFIKIGETQYSVRLNNAPASIE
ALNNLPVKVVNGATIYMRDVAYVRDGSAPQQNIVHVEGSRSALLTILKNGATSTLAIVEG
VKDKLPSIAATLPDSLRILPIGDQSLFVKAAVQGVIHEGAIAAALTSLMILLFLGSWRST
VIIALSIPLAILGAIAALAAFGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKT
VIEAILAGAAQIVTPAFVSLLCICIVFVPMFFLPGVAGFLFVPMALAVVFAMIASFVLSR
TLVPTMAMYLLKAHRPGNEDEHLAGTAGSRNPLVRFQRGFEHRFEKVRAGYVGLLRRALQ
ARKPFLLGFMAVVLLSFALVPFLGSNFFPSVDSGQIAMHVRVPAGTRIEQTAATFDRIAR
EVRTIIPATELTSITDNIGLPVSSINTVYNNSGTIGPQDGDMLIALAEGHRPTEQVVAEL
RRELPRRFPGSTFSFLPADITSQILNFGAPAPIDVQIAGKKAADNRAYAQKLLARIATVP
GLADARIQQPAYAPQLNVDVDRSRAGQYGLTERDVTTSLASQLAGTSQTAPVFFVNPENG
VQYPVVAQAPEYLVGSMGDLSNLPVSGAANVPVQPLGGLAAIERSSTVPVVSHYNIEPVL
DIFATTQGRDLGAVAGDVRRAIRQLEAEQPKGVTVTIRGQYATMNTAFSGLGFGLLGAIV
LIYLLIVVNFQSWVDPFVIITALPAALAGIVWMLFTTGTTLSVPALTGAIMCMGVATANS
ILVVSFARERLAELGDATMAAIEAGMVRFRPVLMTALAMIIGMAPMAFGLGEGGEQNAPL
GRAVIGGLICATVATLFFVPTVFALAHRKRDAEAVSLEMQSSHA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtatcgtcaaggtcgccctgcatcgtccgctgaccttcatcgtcatggcgatc
ctgatcgcgatcgggggcacgctggcggcgctgcgcacgccggtcgacatcttccccaac
atccgcatcccggtgatcgccgtggcctggcaatatgccggcctgccgccccaggacatg
gcggaccgggtcatcggcccctatgagcgggtgctgaccaccacggtcaacgacatcgac
catatcgagagccagtcgctgctcggcgtcggcatcgtcaagatctacttccagccgggc
gccgacatccgcaccgcgacggcgcaggtcacctcgatctcgcagaccgtgctgcggcag
atgccgccgggcaccacgccgccgctgatcctcaactacaacgcgtcgaccgtgccgatc
ctccagctcgccctgtcgggcaaggggctgtcggagcagcagttgttcgacatcggccag
aaccagatccggccgcagctcgtcaccgtgcccggcctcgccatgcccttcccttcgggc
ggcaagcagcggcaggtgcagatcgatctcaacccgctcgcgctccagtcgaagggcctg
tcggcgcaggacgtcggcgccgcgatcgccgcgcagaaccagatcaaccccgccggcttc
atcaagatcggcgaaacccagtacagcgtccgcctgaacaacgcgcccgcgtcgatcgag
gcgctcaacaacctgccggtcaaggtggtcaacggcgcgaccatctacatgcgcgacgtc
gcctatgtccgcgacggcagcgcgccgcagcagaacatcgtccatgtcgagggaagccgg
tcggcgctgctgaccatcctcaagaacggggcgacgtcgaccctggcgatcgtcgagggg
gtcaaggacaagctgccgagcatcgccgcgacgctgcccgacagcctccgcatcctgccg
atcggggatcagtcgctgttcgtgaaggcggcggtgcagggcgtcatccacgagggcgcc
atcgccgccgcgctgacctcgctgatgatcctgctgttcctcggctcgtggcgctcgacg
gtgatcatcgcgctgtcgatcccgctcgccatcctcggcgcgatcgcggcgctcgccgcc
ttcggccagacgctcaacgtcatgacgctgggcggcctcgcgctcgcggtcggcatcctc
gtcgacgacgcgacggtgacgatcgagaacatcaactggcacctcgagcagggcaagacc
gtgatagaggcgatcctcgccggcgcagcgcagatcgtcacgccggccttcgtctcgctg
ctctgcatctgcatcgtgttcgtgccgatgttcttcctgcccggcgtcgccggcttcctg
ttcgtgccgatggcgctggcggtcgtcttcgcgatgatcgcctccttcgtgctgtcgcgc
acgctggtgccgacgatggcgatgtacctgctcaaggcgcaccggcccggcaacgaggac
gagcatctcgccggcacggccggctcgcgcaatccgctggtccggttccagcgcggcttc
gagcatcgcttcgagaaggtccgggccggctatgtcggcctgctccgccgcgcgctccag
gcgcgcaagcccttcctgctcggcttcatggcggtggtgctgctgtcgttcgcgctggtg
ccgttcctcggcagcaacttcttcccgtcggtcgattccggccagatcgcgatgcacgtc
cgcgtccccgccggcacccgcatcgaacagaccgccgcgaccttcgaccgcatcgcccgc
gaggtccgcacgatcattccggcgaccgagctgacgtcgatcacggacaatatcggcctg
ccggtcagctcgatcaacaccgtctacaacaacagcggcacgatcggcccgcaggacggc
gacatgctgatcgcgctcgccgagggccatcgtccgaccgaacaggtcgtcgccgagctg
cggcgcgagctgccgcgccgtttccccggctcgaccttctccttcctgccggccgacatc
accagccagatcctgaacttcggcgcgccggccccgatcgacgtccagatcgccggcaag
aaggcggccgacaaccgcgcctatgcgcagaagctgctggccaggatcgcgaccgtcccc
ggcctggccgatgcccgcatccagcagccggcctacgcgccgcagctcaacgtcgacgtc
gatcgctcgcgcgccggccaatatgggctgaccgagcgcgacgtcaccaccagcctcgcc
agccagctcgccggcacctcgcagaccgcgccggtcttcttcgtcaatccggagaacggc
gtgcaatatccggtggtcgcgcaggcgcccgaatatctggtcggatcgatgggcgacctg
tccaacctgccggtgtcgggcgccgccaacgtgccggtgcagccgctcggcggcctcgcc
gcgatcgagcggtccagcacggtgccggtcgtctcgcactataatatcgagccggtgctc
gacatcttcgcgaccacgcagggccgcgacctgggcgcggtcgcgggcgacgtgcggcgc
gcgatcaggcaattggaggcggagcagcccaagggcgtgaccgtcaccatccgcggccaa
tatgcgacgatgaacaccgccttctcggggctcggcttcggcctgctcggcgcgatcgtg
ctgatctacctgctgatcgtcgtcaacttccagagttgggtcgatccgttcgtgatcatc
accgcactgcccgcggcgctggccggcatcgtctggatgctgttcaccaccggcacgacg
ctgtcggtgcccgcgctgaccggcgcgatcatgtgcatgggggttgcgaccgccaactcg
atcctggtcgtcagcttcgcgcgcgaacggctcgccgagctgggcgacgcgaccatggcc
gcgatcgaggcgggcatggtccgcttccgcccggtgctgatgaccgcgctcgcgatgatc
atcggcatggcgccgatggcgttcgggctgggcgagggcggcgagcagaacgccccgctc
ggccgcgccgtgatcggcggcctgatctgcgccaccgtcgccaccctgttcttcgtcccc
accgtcttcgccctcgcgcaccgcaagcgggatgcggaggccgtctccctggaaatgcag
tcaagccatgcctga
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integrated database retrieval system
