Sphingobacterium zhuxiongii: GFH32_14990
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Entry
GFH32_14990 CDS
T06292
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sphe
Sphingobacterium zhuxiongii
Pathway
sphe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GFH32_14990 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphe03400
]
GFH32_14990 (nth)
Enzymes [BR:
sphe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GFH32_14990 (nth)
DNA repair and recombination proteins [BR:
sphe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GFH32_14990 (nth)
Prokaryotic type
GFH32_14990 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
DUF2400
HHH_5
DUF763
Motif
Other DBs
NCBI-ProteinID:
QGA27541
UniProt:
A0A5Q0QF04
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All DBs
Position
3566696..3567379
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AA seq
227 aa
AA seq
DB search
MLKKDRYKAFVEYFSTHNPDAQTELNYSNPFELLVAVILSAQCTDKRINQITPALFARFP
DAESLAASSVDEVFTYIRSVSYPNNKAKHLVGMGQKLLNEFNGIVPEKIEDLVKLPGVGR
KTANVISSVVYHNPAMAVDTHVFRVSNRLGLTSRATTPLAVEKQLVKYLPKETIAIAHHW
LILHGRYICLARKPKCEQCPITYFCKYFEKTHQVKAVSKTLKQEIEL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagaaagacaggtataaagcttttgtagagtatttttcgactcacaatcccgat
gcacagacagagttaaactatagcaatccctttgaactattagttgcagttattctttct
gcacagtgtaccgataagcggatcaatcaaattaccccagcactttttgcacgttttcca
gatgcagaaagtctcgcggcgagttcagttgacgaggtatttacatacattcgatctgta
agctatcccaacaataaagcaaaacacttagtcggcatgggacagaaactattgaacgaa
ttcaacggcatagttcctgaaaaaattgaagatctggtgaaactacctggcgttgggcgc
aaaacagccaatgttatttcctctgtagtttatcataatccggcaatggcagtcgataca
cacgtgtttcgcgtcagcaacagattaggtttaacatcgcgagcgacaactccccttgcg
gtagagaaacaactcgttaaatatcttccaaaagaaacgatagctatcgcgcatcattgg
ctgatattacatggacgttacatctgtctcgcaaggaagccgaaatgtgagcaatgtccg
attacctatttctgtaaatactttgagaaaacccatcaagtaaaagcggtgagcaagact
ttgaaacaagaaatcgaactataa
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