Sphingomonas sp. FARSPH: DM480_02105
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Entry
DM480_02105 CDS
T05685
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf01501
beta-Lactam resistance
sphf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM480_02105
01503 Cationic antimicrobial peptide (CAMP) resistance
DM480_02105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_02105
01504 Antimicrobial resistance genes [BR:
sphf01504
]
DM480_02105
Transporters [BR:
sphf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DM480_02105
Antimicrobial resistance genes [BR:
sphf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DM480_02105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AXJ94462
UniProt:
A0A345WLB0
LinkDB
All DBs
Position
complement(418436..421648)
Genome browser
AA seq
1070 aa
AA seq
DB search
MSRYFIDRPIFAYVLAIVTMLAGILAIRSLPIAQFPAIAPPAVSITATYPGADAQTLENT
TTQIIEQQLKGIDNLRYFSSSSSSAGQATITLTFEQGTDPDIAQVQVQNKLQAATPLLPQ
EVQRQGLIVAKATQNFLMFVGLYSADGSHNDSDLSDYIVSKLQDPLARVNGVGDTIVFGS
QYAMRVWVDPLKLNNYALTMADVTSAITAQNAQVSAGQIGAQPAPKEQMLNATVSVESRL
TTPEQFAAIRLKSNTDGSVVRLRDVARVEIGAENYGFSSQWNGKPASGIGIKLAPGANAL
TTVAAVKERVNAIAKQFPSDVKVIYPYDTSPFVRLSVEQVVHTLVEAIILVFLVMFLFLQ
NWRATLIPTIAVPVVLLGTFGILAAAGYSINTLTLFGMVLAIGLLVDDAIVVVENVERLI
TTEHLSPKEAARKSMDEITGALIGIALVLSAVFLPMAFFGGSTGVIYRQFSITIVSAMVL
SIAVALILTPALCATILKPHDANKVEGNGPLARFFRWFNDKFERGQVRYERGVVRTAKSW
KRSMLVYLLIVLGMGFLFMRLPTGFLPDEDQGIMIALVQGPPGATTARTQKGLDTIRDHF
LQKEGGNVQGVFTVNGFSFAGQGQNSGIAFIPLKEWSDRKGAANKAQAIAGRAMGTFSQF
KDAMIFAVIPPAVQELGNATGFDLQLVDEAGIGHEKLVAARNMMLGMAMGDKSLTGVRPN
ALDDAPQLKIDVDQDKARALGLDLSTVNSTISTAWGGSYVNDFIDRGRVKRVYIQADEPY
RQKPEDVGSFYVRGDSGTMAPFTAFSTLSWKQAPTQLTRYNGQPSMEILGAPAPGVSSGA
AMKAMEAIQAKLPPGTGLEWTGLSYEERLSGGQAPALYGLSLLIVFLCLAALYESWSVPI
SVMLVVPLGILGAVLAATLTGLNNDIYLQVGLITTIGVSAKNAILIVEFAEERMAEGMKP
FEAAVAAAKLRLRPILMTSLAFVFGVLPLAISTGAGAGGQNAIGRAVVGGMLSATILAIF
FVPMFFVVVLRLFGQGGHAEPAAHDDPHGAPPHDGGTQDDTEGRPAPQGA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgctatttcatcgatcgcccgatcttcgcctatgtgctggcgatcgtcacgatg
ctcgcgggcatcctggcgatccgcagcctgccgatcgcgcaattccccgccatcgcaccc
cccgcggtgtcgatcaccgcgacctatccgggcgccgacgcccagacgctcgaaaatacc
acgacgcagatcatcgagcagcagctgaagggtatcgacaaccttcgctatttctcgtcg
tcctcctcctcggcgggtcaggcgacgatcacgctgaccttcgaacagggcaccgatccc
gacatcgcgcaggtgcaggtgcagaacaagctccaggcggcgacgccgctgctgccgcag
gaggtccagcgccaggggctgatcgtcgccaaggcgacgcagaacttcctgatgttcgtc
ggcctctattcggcggacggcagccacaacgattctgacctctccgactatatcgtctcg
aagcttcaggacccgctcgcgcgcgtcaacggtgtcggcgacacgatcgtgttcggctcg
caatatgcgatgcgcgtctgggtcgatccactgaagctcaacaattacgcgctgacgatg
gcggacgtgacgtcggcgatcactgcgcagaacgcgcaggtgtcggcgggccagatcggc
gcgcagcccgcgcccaaggaacagatgctcaacgccaccgtatcggtggaatcgcgtctg
accacgccggagcaattcgccgcgatccggctgaagagcaacaccgacggctcggtcgtc
cgtcttcgcgacgtcgcgcgggtcgagatcggcgcggagaattacggcttctcgtcgcaa
tggaacggcaagcccgcgtcgggcatcggtatcaagctcgcccccggcgccaacgcgctg
accacggtcgccgcggtcaaggaacgcgtcaacgcgatcgccaagcaattcccgtccgac
gtcaaggtcatctacccctacgacacctcgccgttcgtgcgcctgtcggtggagcaggtc
gtccataccttggtcgaggcgatcatcctcgtcttcctcgtcatgttcctgttcctgcag
aactggcgggcgacgctgatcccgacgatcgcagtgcctgtcgtgctgctcggcaccttc
ggcatcctcgccgcggccggctattcgatcaacacgctgaccttgttcggcatggtgctc
gccatcggcctgctcgtcgacgacgcgatcgtcgtggtcgagaacgtcgaacgcctcatc
accaccgaacacctgtcgccgaaggaagcggcgcgtaagtcgatggacgagatcaccggc
gcgctgatcggcatcgcgctggtgctgtcggcggttttcctgccgatggcgttcttcggc
ggttcgacgggcgtcatctatcgccagttctcgatcacgatcgtctcggcgatggtcctg
tcgatcgcggtcgcgctgatcctgacgccggcgctctgtgcgacgatcctgaagccgcac
gatgccaataaggtcgagggtaacggtccgcttgcgcgcttcttccgctggttcaacgac
aagttcgaacgcggccaggtccgctacgaacgcggcgtcgtgcgcaccgcgaagagctgg
aagcgctcgatgctcgtctacctgctgatcgtgctcggcatgggcttcctgttcatgcgt
ctgccgacgggcttcctgcccgacgaggatcagggaatcatgatcgcgctggtccagggc
ccgccgggcgccaccaccgcgcgcacgcaaaagggcctcgacacgatccgcgaccacttc
ctgcaaaaggagggcggcaacgtccagggcgtgttcaccgtcaacggcttcagcttcgcc
ggccagggccagaacagcggcatcgccttcatcccgctcaaggaatggagcgaccgcaag
ggcgctgcgaacaaggcgcaggcgatcgcgggccgggcgatggggaccttctcgcagttc
aaggacgcgatgatcttcgcggtcatcccgcccgcggtgcaggaactgggtaacgccacc
ggctttgacctgcagctcgtcgacgaagcaggaatcgggcacgagaagctcgtcgccgcg
cgcaacatgatgctgggcatggcgatgggcgacaagtcgctcaccggcgtgcgccccaac
gcgctcgacgatgcgccgcagctcaagatcgacgtcgaccaggacaaggcgcgcgcgctc
gggctcgacctgtcgaccgtcaacagcacgatctcgaccgcctggggcgggtcgtacgtc
aacgatttcatcgatcgcggccgcgtcaagcgcgtctatatccaggcggacgagccgtac
cggcagaagccggaggatgtcggcagcttctacgtgcgcggcgacagcggcacgatggcg
ccgttcaccgccttttccacgctgtcgtggaagcaggccccgacgcagctgacgcgctac
aacggccagccgtcgatggagatcctgggtgcgccggcgcccggcgtatcgtccggcgcc
gcgatgaaggcgatggaggcgatccaggcgaagctgccacctggcaccgggctcgaatgg
acgggcctcagctacgaggaacgcctctcgggcggccaggcgccggcactctacggcctg
tcgctgctgatcgtcttcctgtgccttgccgcgctctacgaaagctggtcggtgccgatc
tcggtgatgctcgtcgtgccgctcggcatcctcggcgcggtgctcgccgcgacgctgacc
gggctcaacaacgacatctacctccaggtcggcctgatcacgacgatcggcgtgtcggcg
aagaacgcgatcctgattgtcgaattcgccgaggaacggatggcggaagggatgaagccg
ttcgaagccgcggtcgcggcggcgaagctgcgcctgcggccgatcctgatgacgtcgctg
gccttcgtcttcggcgtgctgccgctggcgatctcgaccggcgcgggcgcaggcggccag
aatgcgatcggccgcgcggtggtcggcggcatgctgtcggcgacgatcctcgcgatcttc
ttcgtgccgatgttcttcgtcgtcgtcctgcgcctgttcgggcagggcggccacgcggag
ccggcggcccacgacgatccccatggcgcgccgccgcatgacggtggcacgcaggacgac
actgaggggcggcccgccccgcagggagcgtga
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