Sphingomonas sp. FARSPH: DM480_03310
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Entry
DM480_03310 CDS
T05685
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf01501
beta-Lactam resistance
sphf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM480_03310
01503 Cationic antimicrobial peptide (CAMP) resistance
DM480_03310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sphf03036
]
DM480_03310
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_03310
01504 Antimicrobial resistance genes [BR:
sphf01504
]
DM480_03310
Chromosome and associated proteins [BR:
sphf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DM480_03310
Transporters [BR:
sphf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DM480_03310
Antimicrobial resistance genes [BR:
sphf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DM480_03310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AXJ96820
UniProt:
A0A345WT18
LinkDB
All DBs
Position
661647..662873
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AA seq
408 aa
AA seq
DB search
MSSVPVTALTVTALAATLALSACGDGSAKDKGARGANQGPVTVGYVVVQPSDAAMVTELA
GRTSAYESSDVRPQVNGIIRRRFFTEGTIVRKGQPLYEIDPRLYRASVNQAQANLLSAQA
NAEATRIQADRYRPLAQIEAVSKQDYTNAVATARQAAASVAQNRAALETARVNLSFTTVP
APITGRIGRSLYTVGALVSSSQTDPLAQIQRLDPMFVDIQQSAADLLSLRRSLSQGGVIP
ASAQVRLMLEDGSDYGQTGTVEFAETVVDTQTGTVTLRARFPNPQGLLLPGMFVRARFAQ
AINTRAFLVPQQAVSRDPKGNATLFVVGPNNKAVQRSITADRTQGTNWVVTAGLNSGDKV
IAQGLANVKPNQAIKPVPANAPQTVKPPSPEQMKQAQEKGGAGGRGGR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
ctgtcgtccgtccccgtgaccgcccttaccgtcaccgctcttgccgcaacgctcgcgctg
tcggcctgcggcgacggctcggcaaaggacaagggcgcgcgcggcgccaaccaaggtccc
gtcacggtcggatatgtcgtcgttcagccgtccgacgccgcgatggtcaccgaactcgcc
ggccgcaccagcgcatacgaaagctcggacgtgcgcccgcaggtcaacggcatcatccgt
cgccgcttcttcacggagggcacgatcgtccgtaagggccagccgctctacgagatcgat
ccgcgcctctatcgcgcctccgtcaaccaggcgcaggcgaacctgctgagcgcacaggcg
aatgccgaggcgacgcgaatccaggccgaccgctaccgcccgctcgcgcagatcgaggcg
gtatccaagcaggattacaccaatgcggtcgccaccgcgcgtcaggccgccgcgtcagtg
gcgcagaaccgcgccgcattggaaaccgcgcgcgtcaacctgagcttcaccaccgtgccc
gcgccgatcaccgggcgcatcggccggtcgctgtacaccgtcggcgcgctggtgtcgtcc
agccagaccgatccgctggcgcagatccagcggctcgacccgatgttcgtcgatatccag
caatccgccgccgacctgctcagcctgcgccgcagcctgtcgcagggcggggtcattccc
gcctctgcgcaggtccgcctgatgctggaggacggcagtgattacggccagaccggtacg
gtcgaattcgccgaaacggtggtcgacacgcagaccgggaccgtcacgctgcgcgcgcgc
ttccccaatccgcaaggcttgctgttgcccggcatgttcgtacgcgcccgcttcgcgcag
gcgatcaacacgcgcgccttcttggtgccgcagcaggcggtgtcgcgcgatccgaagggc
aatgcgacgctgttcgtcgtcggtccgaataacaaggcggttcagcgctccattaccgcc
gaccgcacgcagggcacgaactgggtggtgaccgcgggcctcaattccggcgacaaagtc
atcgcccagggccttgccaacgtgaagcccaatcaggcgatcaagcccgttcccgccaac
gctccgcaaacggtgaagccgccctcgcccgagcagatgaagcaggcccaggaaaaaggc
ggcgcaggcggccggggcgggcgctga
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