KEGG   Sphingomonas sp. FARSPH: DM480_17680
Entry
DM480_17680       CDS       T05685                                 
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
sphf  Sphingomonas sp. FARSPH
Pathway
sphf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM480_17680
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphf02044]
    DM480_17680
Enzymes [BR:sphf01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     DM480_17680
Secretion system [BR:sphf02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   DM480_17680
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AXJ97510
UniProt: A0A345WV08
LinkDB
Position
p03:29272..31083
AA seq 603 aa
MTQRGGTQRSGAALAAGLPFALVLVFLIGSIIAWFVLGLPASKYDPLKMPAFFWYYRGDP
VVLKALGAGVLAGSLVAGLLLFWFVSRKPPLHGAARFAKESEIRRGGFRSNDGVVLGKKR
GKFLIFGGNEHCIVEAPTRSGKGVGIVIPNLLSWQDSLVVLDVKRENWDATAGFRARFGQ
AVYLFNPTDPEGRTARYNPLSYIDREDADQVIIELQKIATMLFVPPERGEPFWTDSARTA
FVGVGAYLAQSSEPFTIGAIYRLMTTGDTRGFFRKALEDPTLSQGCRNALADFTSGADNT
FAGIVQTVTSKLSLWLNPRVDAATEESDFDLRELRSRPMSIYLGVSPDELDRVAPLYNLL
FQQLIDLNVRDLPDKRTPLKILVVLDEFARIGRAQVIASAFSYVAGYGIRLLPVIQSRSQ
LRAVYGEHVANEIVANCGVEVAFTPKEVRVANELSERIGYVGQESVTKSLTIHGMLANRS
KSMSDQRRALLLPQELMQFPDSELLLLRGGMPPIHGDKIRYFADRHFTQRVLPAPTVPPI
ARRVRDDEDLPDCAPPDFDQLTDPDALTFAMDCVVTSDFPDMLIDVEAERHGNEVVGVIE
QER
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgacccagcggggcggcacgcagcgtagcggcgcggctctggcggcgggcctgccgttc
gccctggtcctcgtcttcctcatcggctcaatcatcgcgtggttcgtcctcgggctgccc
gcgtcgaaatacgatcccctcaagatgccggccttcttctggtactatcggggcgacccg
gttgtgctgaaggcgcttggtgccggcgttctcgccggctccctcgtcgccggcctgctc
ctgttctggttcgtctcgaggaaacctccgctccacggtgcagcgcgcttcgccaaggaa
agcgagatccgccgtggaggcttccgatcgaacgacggcgttgttctcgggaagaagcgc
ggcaaattcctgatcttcggcggcaatgaacattgcatcgtcgaagctcctacccgctcg
ggcaaaggcgtcggcattgtcatcccgaacctgcttagctggcaggactcgcttgtcgtt
ctcgatgtgaagcgggagaattgggacgccacagcgggcttccgtgcgagattcgggcag
gcggtctatctcttcaatccgaccgatccggaggggcgcacggctcgctacaatccgctg
agctacatcgatcgcgaagacgccgatcaggtcatcattgagctacagaagatcgcgacc
atgctgttcgtcccgcctgagcggggcgaaccgttctggacggactctgcgcgaacggcg
ttcgtgggcgtcggcgcgtatctggcgcagtcctcggagcccttcacgatcggcgctatc
taccggctcatgacgacgggcgacacgcgcgggttcttccgcaaggcgctcgaagatccg
acgctctcccaagggtgccgtaacgccctggccgacttcacatcgggcgctgacaacacg
ttcgccggcatcgtccagaccgtcacgtcaaagctgagcctctggctcaacccgcgcgtg
gatgcggcaacggaagaaagcgatttcgatctgcgcgagctgcggtcgcggccgatgtcg
atttatctcggcgtctcgcccgacgagctggaccgcgttgcgccgctctacaatctgctg
tttcaacagctcattgatctgaacgtgcgcgatctgccggacaagcggaccccgctcaag
atcctcgtcgtgctagacgagttcgcgcgcatcggccgcgcccaggtcatcgcaagcgcg
ttctcatacgtcgccggctacggcatccgcctcttgccggtgatccaatctcgttcgcag
ctccgtgccgtctatggcgagcatgtagcgaacgagattgttgccaactgcggtgttgaa
gtcgcgttcacaccgaaggaggttcgggtcgcgaacgagctgtctgagcgcattggctat
gtcgggcaggagtccgtcaccaaatcgctgacgatccacgggatgctcgccaatcgctca
aagtcgatgtctgaccagcgccgcgcgctgctgctgcctcaagagctgatgcagtttccg
gatagcgagctgctgttgctgcgtggcggtatgccaccgatccacggcgacaaaatccgg
tacttcgctgatcggcatttcacccagcgcgttctccctgcgccgacggtgccgccgatc
gcgcgacgtgtccgtgacgacgaggatcttccggactgcgcgccccccgacttcgatcaa
ctgaccgatcccgacgccctcactttcgcgatggattgcgtcgtcacgtcggactttcct
gacatgctgatcgatgtcgaagcggagcgccacggcaacgaggttgtgggtgtaatcgag
caggagaggtaa

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