Sphingomonas sp. FARSPH: DM480_17800
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Entry
DM480_17800 CDS
T05685
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf01501
beta-Lactam resistance
sphf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM480_17800
01503 Cationic antimicrobial peptide (CAMP) resistance
DM480_17800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_17800
01504 Antimicrobial resistance genes [BR:
sphf01504
]
DM480_17800
Transporters [BR:
sphf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DM480_17800
Antimicrobial resistance genes [BR:
sphf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DM480_17800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF3938
Motif
Other DBs
NCBI-ProteinID:
AXJ97529
UniProt:
A0A345WV27
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All DBs
Position
p03:55331..58543
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AA seq
1070 aa
AA seq
DB search
MDSYFVHKPAVAWVIALFIALFGTMALINLPIEQYPAVAPPSLTLSYTYNGADAETMDKN
VTAVVEREMNGVPNFLYMSSTSRANGTGEIVVTFTSGTDLDVARTQVQDRLNRAEPRLPE
DVRRLGIQIADNASGFLEVIVLKSRTGATSPLDLGDFASTKVVNELRRVPGVGNVSLFSS
EKAMRVWLDPEKLAGYSLSASDALAAVQEQNSQTAGGGLAEQPLAPGSSFNARIVTQNRF
TTAEQFRDIIVRANPDGSTVRLGDVARVELAADNYNFKSTLDGKEVAGLAVQLSSGSNAI
ATKNALSARMTELERSFPKDITWAVSYDTTPFIQASIDNVIQTLVEAMLLVFLVMFLFLQ
SWRATVIPALVVPIALLGGCLGLWAFGFSINQLSLFAMVVAIGILVDDAIVVVENVERIM
AEEGLSPARATIKAMGQIRGAIIGITAVLIAVFLPMAFFPGSTGGIYRQFSVTLAVSIFF
SALLALTLTPALCATLLKPHTHKPGHTPEPRSGWRGWPQRFFNGFNDRFTRSTDRYAGGV
AAMLSRPLRWLAVFVAVVGVTWLLFARLPGGFLPEEDQGYFVINYDAPPAATMAQTEAAV
KAVETEFAKLPQSQEIFSVIGFNFFGQGQTAGLSWAMLKPFDERKGKDLSVDSAIGAVFG
AAANVPGANIFAINPPAIDSLGNATGFTMKIEDRGGNDPAGLQAALGAILGAASQNPKLA
GVRPEGQPPSPQLYVDIDRVQARALGLSIADVNATLSIAFGSAYANDFSNEGNVQRVYLQ
ADAPQRMTEDDVLNLRVRGSSGQMVPFSAFTKVHWMQGATQLQRYNGYPSLTISGQAAPG
ESSGTALKEMEKIADQILKGSQSYEWTGTAFEEKQAGGQIGLLLGLSLIVVFLLLVGLYN
SWAIPLSVLLVVPFGVLGAVLFTMLRGLSADVYFNIGLITIIGLAAKNAILVVEFAIEDE
VGDRTPLQATLEAARQRLRPILMTSLAFILGMVPLVIAGGAGSASRHAVGTGVMGGMIAA
TAFGIFFTPLFYFAARKWLSRASVHHASDAEEPKPLPPTATPDEGGTAHA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggacagctatttcgtacacaagcccgccgtcgcgtgggtcatcgccctgttcatcgcg
ctgttcggaacgatggcgctcatcaacctgccgatcgagcaatatccggcggtcgcgccg
ccgtctctgacactcagctacacctataacggtgccgacgccgagacgatggacaagaat
gtcaccgccgtcgtcgagcgcgaaatgaacggcgtgcccaatttcctctatatgtcgtcg
accagccgcgccaacggcaccggcgagatcgtggtcactttcacctccggcactgatctc
gatgtcgcgcgaacgcaggtgcaggatcgtctcaaccgcgccgaaccccgcctgcctgag
gatgtgcgtcgtctgggcatccagattgccgacaatgcttcgggcttcctcgaagtcatc
gtcctcaagtcccgtaccggcgcgacgtcgccgctggacctgggggatttcgcatcgacc
aaggtggtcaacgaactgcgccgcgtgccgggcgtgggcaacgtctcgctcttctcctcg
gagaaggcgatgcgggtctggctcgatccggagaagctggccggatacagcctgtcggcg
tccgatgcgctcgcagccgttcaggagcagaacagccagaccgccggcggcggtctcgcg
gaacagcctctcgcgcccggctcgtctttcaatgcgcgcattgtgacccagaaccgcttc
accactgcggagcagttccgcgatatcatcgtgcgcgccaatcctgatggatcgacggtc
cggctcggcgacgtcgcgcgcgtcgaactcgccgccgacaattataatttcaaatcgacg
ctcgacggcaaggaagtcgcggggcttgccgtccagctcagttccgggtccaacgccatc
gcgaccaagaacgcgctttccgcgcggatgacagagctggagcgcagctttccgaaggac
atcacctgggcggtgtcctacgacaccacgccgttcatccaggcctcgatcgacaatgtg
atccaaacgctggtcgaggcgatgctgctggtgttcctcgtcatgttcctgttcctccag
agctggcgcgcgacggtgatcccggcgcttgtggttccgatcgcgctgcttggcggctgt
ctcggtctctgggccttcggcttctccatcaaccagctttcgctgttcgcgatggtcgtg
gcgatcggcatccttgtcgatgacgccatcgtcgtcgtcgagaatgtcgaacgcatcatg
gccgaagaaggcctgtctcccgccagagccacgatcaaggccatgggccagattcgcggt
gcgatcatcggcattaccgctgtgctcatcgccgtgttcctgccgatggcgttcttcccc
ggctccaccggcggcatctaccgccagttctcggtgacgctggcggtgtcgatcttcttc
tcggcgttgcttgcattgacgctgaccccggcgctctgtgccactctcctcaaaccgcac
acccataagccgggtcatacgcctgagccgcgatccggctggcggggatggccacagcgc
ttcttcaatggtttcaacgatcgcttcacccgttcgactgatcgctatgcaggcggggtc
gctgccatgctgtcgcggccgctgcgctggctcgctgtgttcgtcgccgtggtcggcgtg
acctggctgctgttcgcgcgcctgccgggcggcttccttcccgaggaagatcagggctat
ttcgtgatcaactatgatgccccgccagcggcgacgatggcgcagaccgaagcggcagtg
aaagccgttgaaaccgagttcgcgaagcttccccagtcgcaggagattttctccgtcatc
ggtttcaacttctttggccagggtcagacggcaggcctttcctgggcgatgctcaagccc
tttgacgaacgcaagggcaaggacctgtcggtcgattccgccattggcgccgtgtttggc
gcggcggcgaatgttccgggcgcgaatatcttcgcgatcaatccgccggcgatcgactcg
cttggcaacgccaccggcttcacgatgaagatcgaggatcgcggcggcaacgacccggca
gggcttcaggcggcgttgggcgccatcctcggtgcggcgtcgcagaatccgaagctggcg
ggtgtccgtcctgaggggcaaccgccttcgccgcaactctatgtcgacatcgaccgtgtc
caggcgcgcgcgctcggcctctcgatcgccgacgtcaacgccacgctctcgatcgcgttc
ggatcggcctatgccaacgacttttccaacgagggcaatgtccagcgtgtctatctgcaa
gccgacgcgccgcagcggatgaccgaggatgatgtgctcaacctgcgggtgcgcggcagc
agcggccagatggtgcccttttcggccttcaccaaggtccactggatgcagggggcaacc
cagttgcagcgctataatggctatccgtcgctgaccatctccggccaggcggcgccgggc
gagtcctccgggaccgcgctcaaggagatggagaagatcgctgaccagatcctcaagggc
agtcagtcctatgaatggaccggaacagccttcgaggagaagcaggcgggcggccagatc
ggcctgctgcttgggctgtcgctgatcgtcgtcttcctcctgctggtcgggctttacaac
agttgggcgatcccgctttcggtcctgctggtggtgccgttcggtgttctcggcgcggtg
ctgttcaccatgttgcgcggcctctcggcagacgtctatttcaacatcggccttatcacg
atcatcggcctggccgccaagaatgcgatcctcgtggtcgaattcgcgatcgaggacgag
gttggcgaccgcacgccgctccaagcgacgctggaggccgcgcggcaacgtctgcgtccg
atcctgatgaccagtctggcgttcattctcggcatggtgccgctggtgatcgccggtggg
gccgggtcggccagccgtcatgccgtcggcaccggtgtgatgggcggcatgatcgcggcg
accgctttcggcatattcttcacgccgctcttctacttcgcggcgcgcaaatggctgtcg
cgcgcgtctgttcatcacgccagcgatgcggaggaaccgaaacccttgccgccaaccgcc
acacctgatgagggaggaacggctcatgcataa
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