Sphingopyxis fribergensis: SKP52_03345
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Entry
SKP52_03345 CDS
T03542
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00020
Citrate cycle (TCA cycle)
sphk00785
Lipoic acid metabolism
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01120
Microbial metabolism in diverse environments
sphk01200
Carbon metabolism
sphk01210
2-Oxocarboxylic acid metabolism
Module
sphk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SKP52_03345 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SKP52_03345 (sucA)
Enzymes [BR:
sphk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SKP52_03345 (sucA)
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Paralog
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
Motif
Other DBs
NCBI-ProteinID:
AJA07598
UniProt:
A0A0A7PEG9
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All DBs
Position
674298..677120
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AA seq
940 aa
AA seq
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MNLERQSFDIDEPQAGPSWAPKNWPQIDSDDLTAALDPQQMQVAVKAAAAKAGAALSSAE
VERAADDSIRAMMLIRTYRVRGHLAANLDPLGLSTRELPADLTPEFHGFVGADQDRPVFI
GGTLGLERATVREIVAILRANYCGNVGLEYMHIADLKERQFLQERMEGADKIIEFSVEGK
RAILNKVIEAEEWEKFLARKYVGTKRFGLDGGESMIPAMEAIIKYGGQYGVREIVYGMAH
RGRLNMLANVMAKPYKVIFHEFAGGSANPDDVGGSGDVKYHLGTSTDREFGGASVHMSLV
PNPSHLEAADPVVLGKVRAQQVVRDDLEKHEQVLPVLIHGDAAFAGQGIVWECLGFSGIR
GYNTGGCIHFIVNNQIGFTTSPQFARSSPYPSDVAKGVMAPILHVNGDDPEAVTFACKLA
IDFRQQFKRDVVIDMWCYRRFGHNEGDEPSFTQPLMYAVIRQHPPVSQLCAAKLEAEGVI
DAGWADAHRAEFVARLEGDFEAAKSYKPNKADWFAGRWSGLHAPADPENARRNISTGVSD
KLFDAIGRTLTTIPDDVEVHKTLRRVIDARGAMFADKGDGEVFDWATAESLAFGTLLSEG
YQVRLSGQDSGRGTFSQRHAVWVDQKTEAKYVPLTTVPHGRFEVLDSPLSEYGVLGFEYG
YAMADPKSLVLWEAQFGDFANGAQIMIDQFIASGEAKWLRANGLVLLLPHGYEGQGPEHS
SARLERFLQLCAGDNIQVCNISTPSNYFHVLRRQMLRPFRKPLIIMTPKSLLRHKLAVSQ
RSDFLGDAHFRRIMSDRTPPADKDVKRVVLCSGKVGYDLMEARDAAGLTDTTVVRIEQLY
PFPGEALSVRLKRMPNLEEVVWAQEEPRNNGAWFFVNELIEDALTDAGKKGMRPRYAGRA
AAASPATGLMSRHQTEQSALVADALGLSVRAEIRRTKNKA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgaacgacaaagcttcgacatcgacgagccgcaggccggcccgagctgggcg
ccgaagaactggccccagatcgatagcgacgacctgaccgccgcgctcgacccgcagcag
atgcaagtcgcggtgaaggccgccgccgccaaggcgggtgccgcgctgtcgagcgccgag
gtcgagcgcgccgccgacgattcgatccgcgcgatgatgctgatccgcacctatcgcgtg
cgcggccatcttgctgccaatctcgatccgctcggcctcagcacgcgcgagctgcccgcc
gacctcacgccggaatttcacggctttgtcggcgccgatcaggaccgcccggtgttcatc
ggcggcacgctcggcctcgagcgcgcgacggtgcgcgagatcgtcgccatcctgcgcgcc
aattattgcggcaatgtcggccttgaatatatgcatatcgccgatctgaaggagcgccag
ttcctccaggaacggatggaaggcgccgacaagatcatcgaattttcggtcgagggcaaa
cgcgccatcctgaacaaggtgatcgaagccgaggagtgggagaaattcctcgcgcgcaaa
tatgtcgggacgaagcgtttcggcctcgacggcggcgaaagcatgatccccgcaatggaa
gcgatcatcaaatatggcggccaatatggcgtgcgcgaaatcgtctatggcatggcgcat
cgcgggcggctcaacatgctcgcgaacgtcatggccaagccgtataaggtgatcttccac
gaattcgccggcggatcggcgaaccccgacgatgtcggcggttcgggcgacgtcaaatat
cacctcggcacctcgaccgaccgcgaattcggcggtgcgtcggtgcatatgtcgctagtt
cccaacccgtcgcacctcgaagccgccgaccccgtcgtgctcggcaaggtgcgcgcgcag
caggtggtgcgcgacgacctcgaaaagcatgagcaggtgctgcccgtgctgatccacggc
gacgcggcgttcgcggggcagggaatcgtatgggaatgcctcggcttctcgggcatccgc
ggttacaacaccggcggctgcatccacttcatcgtgaacaaccagatcggcttcacgacc
agcccgcagttcgcgcgctcgtcgccctatccgtcggacgtcgcaaagggcgtgatggcg
ccgatcctgcacgtcaacggcgacgatcccgaggcggtgacctttgcgtgcaagctcgcg
atcgatttccgccagcagttcaagcgcgacgtcgtgatcgacatgtggtgttatcgccgc
tttggccataacgagggcgacgagccttcgttcacccagccgctgatgtatgccgtcatt
cgccagcatccgccggtgtcgcagctttgcgccgcaaagctggaagccgaaggcgtgatc
gacgcgggctgggccgatgcccaccgcgccgagttcgtcgcacggctcgaaggcgatttc
gaagcggcgaaaagctacaagccgaacaaggccgactggtttgcgggtcgctggtcgggg
ctgcacgcccccgccgatcccgagaatgcgcgccgcaacatctcgaccggggtttcggac
aaattgttcgacgcgatcggccgcacgctgacgacgatccccgacgacgtcgaggtgcac
aagacgctccgccgcgtgatcgacgcgcgcggcgcgatgttcgccgacaagggcgacggc
gaagtgttcgactgggcgaccgccgaaagcctcgctttcgggaccctgctcagcgagggc
tatcaggtccgcctgtcgggccaggattcggggcgcggcaccttcagccagcgccacgcg
gtctgggtcgaccagaagaccgaagccaaatatgtgccgctgaccaccgtgccgcacggc
cggttcgaggtgctcgacagccctctcagcgaatatggcgtgctcggcttcgaatatggc
tatgcgatggccgatccgaagagcctcgtgctctgggaagcgcagttcggcgacttcgcc
aatggcgcacagatcatgatcgaccagttcatcgcgtcgggcgaggccaaatggctgcgc
gccaacggcctcgtgctgttgctgccgcatggctatgaagggcaggggccggaacatagc
tcggcgcgtctcgaacgcttcctgcaactctgcgccggcgacaatatccaggtgtgcaat
atttcgaccccgtcgaactatttccacgtcttgcgccgccaaatgctgcggcccttccgc
aaaccgctgatcatcatgacgccgaaatcgctgctccgtcacaagctggcggtgtcgcag
cgtagcgacttcctcggcgacgcgcatttccggcgcatcatgtccgaccgcaccccgccc
gccgacaaggacgtcaagcgcgtcgtgctctgctcgggcaaggtcggttacgacctgatg
gaagcccgcgacgcggcaggcctgaccgacacgacggtggttcgcatcgagcagctctat
cccttccccggcgaggcgctcagcgttcggctgaagcggatgcccaacctcgaagaggtg
gtttgggcgcaggaagaaccgcgcaacaacggcgcctggttcttcgtcaacgaactgatc
gaggatgcgctgaccgatgcgggcaagaagggcatgcggccgcgctatgcgggccgtgcc
gccgcggcctcgcccgcgacgggcctgatgagccgtcaccagaccgaacagtcggcgctc
gtcgccgatgcgctcggcctcagcgtccgcgccgaaatccgccgtaccaagaacaaagcc
tga
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