Sphingopyxis fribergensis: SKP52_06380
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Entry
SKP52_06380 CDS
T03542
Name
(GenBank) secretion protein HlyD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk01501
beta-Lactam resistance
sphk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SKP52_06380
01503 Cationic antimicrobial peptide (CAMP) resistance
SKP52_06380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sphk03036
]
SKP52_06380
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_06380
01504 Antimicrobial resistance genes [BR:
sphk01504
]
SKP52_06380
Chromosome and associated proteins [BR:
sphk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SKP52_06380
Transporters [BR:
sphk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SKP52_06380
Antimicrobial resistance genes [BR:
sphk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SKP52_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CENP-H
Motif
Other DBs
NCBI-ProteinID:
AJA08201
UniProt:
A0A0A7PDP3
LinkDB
All DBs
Position
complement(1350287..1351441)
Genome browser
AA seq
384 aa
AA seq
DB search
MSRFRPLGCAAGAALALVLASCSSEAPPAPPPPEVNIVTIRTQAVPNVIELPGRVQAFRT
SEVRARVNGIVERRLFSEGSYVRAGTPLFRIDPRELTATANAARAQLARAQATAANARQV
VGRYQPLLADQAIGKQEYDAAVAAQRTAEADVQQAQANLESARLNLGYASVTAPISGRAR
RAEVTEGALVSASQGTLLTTIEQIDRVYVNFGQSSSDLLATRRDMEAGKVSAPQLERVEV
QLILEDGTAYPVIGHLDFFDLSIDEATGTAALRAEFPNPTSALLPGQFVRARIFAGNRAD
GVLIPQRAVKLAADNASVMVLDAKNVATPRPVKLGTMVAGQWAILDGLKPGDRVIVDGLQ
KVQPGQPVRVAAPQGTASTPAAKR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctttcgtcctcttggctgcgccgccggcgctgcgctggctctggtgctggct
tcatgctcgtcggaagcgccccccgcgccgccgccgcccgaagtcaatatcgtgacgatc
cgcacgcaggcagtaccgaatgtgatcgaactgcctggccgcgtgcaggcgtttcgcacg
tccgaagtgcgtgcgcgggtcaacggcatcgtcgagcgccgcctgttcagcgaaggcagc
tatgtccgcgccggaaccccgctgttccggatcgacccccgcgagctgaccgcgaccgcc
aatgcggcgcgcgcacagctggcccgcgcgcaggcaaccgccgccaatgcgcggcaggtc
gtcggacgctatcagccgctgctcgccgaccaggcgatcggcaagcaggaatatgatgct
gcggtggctgcgcagcgcaccgccgaagccgatgtgcagcaggcgcaggccaatctggaa
tcggcgcgcctaaatctgggctatgcgtcggtcaccgcaccgatttccggccgggcgcgc
cgcgccgaagtgactgaaggcgcactggttagtgcctcacaaggcacgctgctcacgacg
atcgagcagatcgaccgggtctatgtcaatttcggacagtcgagttcggacctgctcgcc
acccgccgcgacatggaagccggcaaggtcagcgcgccgcaactcgaacgcgtcgaagtg
cagctgatccttgaggacggcaccgcctatccggtcatcggccacctcgatttcttcgac
ctgtcgatcgacgaggcgacgggcaccgcggcgctgcgcgccgaattccccaaccccacc
tctgctctcttgcctggccagttcgtgcgcgcccgcatctttgccggcaaccgcgccgat
ggcgtgctgatcccgcaacgcgcagtcaagctggcggccgacaatgcgagcgtcatggtg
ctcgacgccaagaatgtcgcgaccccgcgcccggtgaagctcggcacgatggtcgcaggc
caatgggctatcctcgacgggctgaaacccggcgaccgggtgattgtcgacggactgcaa
aaggtccagccaggccagccggtgcgcgtcgcggcgcctcagggcacggcttcgacgccc
gcggcaaagcgttga
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