Sphingopyxis fribergensis: SKP52_21555
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Entry
SKP52_21555 CDS
T03542
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk01501
beta-Lactam resistance
sphk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SKP52_21555
01503 Cationic antimicrobial peptide (CAMP) resistance
SKP52_21555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sphk03036
]
SKP52_21555
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_21555
01504 Antimicrobial resistance genes [BR:
sphk01504
]
SKP52_21555
Chromosome and associated proteins [BR:
sphk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SKP52_21555
Transporters [BR:
sphk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SKP52_21555
Antimicrobial resistance genes [BR:
sphk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SKP52_21555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
Biotin_lipoyl_2
HlyD_3
GO-like_E_set
Motif
Other DBs
NCBI-ProteinID:
AJA11172
UniProt:
A0A0A7PT27
LinkDB
All DBs
Position
complement(4544658..4545818)
Genome browser
AA seq
386 aa
AA seq
DB search
MKKITPTLALLLSACGGGGEQGAPAGHPEVGVVTVRAEAVVLSSELPGRTSAYETSDVRP
QVNGLILQRLFTEGDQVQAGQALYRIDPAPYEAQVASARAALGRSRAAIASTAALARRYG
ELVKINAISRQEAENAVAAAQQARADVAAQEAALRSAQIDLGRTTIRAPISGRIGRSTYT
TGALVSASQADPLTTIQRIDPIFVDIQQSSADVLRLRQQLLSGELSREGGAARVRLKLED
GSAFAEEGVLKFTDVTVDPSTGSQVVRAQFPNKGGLLLPGMYVRAEMVEGTRSNGILVPQ
GAVSRDEKGSATVLVVGAQNKIEMRKLNAPRTVGTNWLVTAGLKPGDKVVVDGAQMLRPG
VVVKAVPAGAAQGARAGQPQQPGQGK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatcaccccgaccctggcgcttctcctgtccgcctgcggcggcggcggcgag
cagggcgcgcctgccggtcaccccgaagtcggagtcgtgacggtgcgcgcggaagcggtc
gtgctcagctccgagctgcctggccgcaccagcgcctatgagacttcggatgtgcgcccg
caggtcaacgggttgatcctgcagcgattgttcaccgaaggcgatcaggtacaggcgggg
caggcgctctatcgcatcgatcccgcgccctacgaggcacaggtcgccagcgcacgcgcg
gcgcttggccgctcgcgcgcggcgatcgcctccacggcggcgctggcgcggcgctatggc
gaactggtcaagatcaacgccatctcgcgccaggaagcagagaacgcggtcgccgccgcc
cagcaggcgcgggccgacgtggcggcgcaggaagcggcgctgcgttccgcccagatcgat
ctgggccgtaccacgattcgcgcgccgatctccggccggatcgggcgttcgacttatacc
accggcgccctggtgtcggcttcgcaggccgatccgctgaccacgatccagcgcatcgac
ccgatcttcgtcgatatccagcagtcgagcgcagacgtgctgcggctgcgtcagcaactc
ctctcgggcgagctttcgcgcgaaggcggggccgcgcgggtgcggctcaagctggaggac
ggcagcgccttcgccgaagaaggcgtactcaagttcaccgacgtgaccgtggatccgagc
accggcagccaagtcgtccgcgctcagttcccgaacaagggtggcctgctgctgcccggc
atgtacgtgcgcgccgaaatggtggagggcacccgcagcaacggcatccttgtgccgcag
ggcgccgtctcgcgcgacgagaagggcagcgccacggttctcgtggtcggcgcgcagaac
aagatcgagatgcgcaagctcaacgcgccgcgcacggtcgggaccaactggctcgtcacc
gcgggcctgaagccgggcgacaaggtagtcgtcgacggcgcacagatgctgcgcccgggc
gtggtggtcaaggcggtgccggcaggtgccgcgcagggcgcgcgcgccggccagccgcag
cagccgggccaggggaagtaa
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