Sphingopyxis fribergensis: SKP52_23535
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Entry
SKP52_23535 CDS
T03542
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SKP52_23535 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphk03400
]
SKP52_23535 (nth)
Enzymes [BR:
sphk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SKP52_23535 (nth)
DNA repair and recombination proteins [BR:
sphk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SKP52_23535 (nth)
Prokaryotic type
SKP52_23535 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AJA11549
UniProt:
A0A0A7PNG5
LinkDB
All DBs
Position
4946548..4947204
Genome browser
AA seq
218 aa
AA seq
DB search
MKKADIFEFYRRLAELNPSPETELQFGNTYQLLVAVVLSAQATDVGVNKATRLLFQDVKT
PQQMIDLGEEGLKQHIKTIGLFNGKAKNVIALSEILVRDFGGAVPADRDTLVDLPGVGRK
TANVVMNCAFGAETFAVDTHIFRVGNRTGLAPGKTVLAVEKQLEKNTPQPFRVGAHHWLI
LHGRYICKARTPECWRCPVDDLCRYKPKTPAPKAKKIA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagccgacatcttcgaattctaccgccggctcgcggaactcaacccgagcccc
gagaccgagctgcaattcggcaacacctatcagttgctcgtcgcggtcgtgctgtcggcg
caggcgaccgacgtcggcgtgaacaaggcgacgcggctgctctttcaggatgtgaagacg
ccgcagcaaatgatcgacctcggcgaagaggggctcaagcagcacatcaagacgatcggg
ctgttcaacggcaaggcgaagaatgtgatcgcgctcagcgaaatcctcgtccgcgacttc
ggcggcgcggtgcccgccgaccgcgacacgctcgtcgacctgcccggcgtcgggcgcaag
accgccaatgtcgtgatgaactgcgccttcggggcggagaccttcgcggtcgacacgcat
atcttccgcgtcggcaaccgcaccgggctcgcacccggcaagacggtgctcgcggtcgaa
aaacagctcgaaaagaacacgccgcagcccttccgggtcggcgcgcatcactggctgatc
ctccacggccgctatatctgcaaggcccggacccccgaatgctggcgctgcccggtcgac
gacctctgccgctacaagcccaagacgcccgcgccaaaggcaaagaaaatcgcctga
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