Sphingorhabdus lutea: LPB140_02935
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Entry
LPB140_02935 CDS
T04602
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00020
Citrate cycle (TCA cycle)
sphl00785
Lipoic acid metabolism
sphl01100
Metabolic pathways
sphl01110
Biosynthesis of secondary metabolites
sphl01120
Microbial metabolism in diverse environments
sphl01200
Carbon metabolism
sphl01210
2-Oxocarboxylic acid metabolism
Module
sphl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LPB140_02935
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LPB140_02935
Enzymes [BR:
sphl01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LPB140_02935
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GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
APG61953
UniProt:
A0A1L3JA60
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All DBs
Position
598950..601730
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AA seq
926 aa
AA seq
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MNDFTPDINLNEAQAGPSWQNKGWPAAMLDDLTVALDPTQMAVEVKAAAAKRGEAMSEQS
VLEAAGDSIRAMMLIRTYRVRGHLAANLDPLGLHQRELPEDLRSEYHGFSDADLDKKVYL
GGTMGLEYATVRELIDLLRANYCGNVGLEYMHISDIEERRFLQERMEGKEANIEFTPEGK
KAILSKVIQGEVYESFLGKKYVGTKRFGLDGGEAMLPALEAVIKYGGQYGVREIVYGMAH
RGRLNILANVMAKPYHVIFHEFSGGSSNPDEVGGSGDVKYHLGTSTDREFDGINVHMSLV
PNPSHLEAVNPVVLGKVRAQQVHRQDTKKHAEVLPVLIHGDAAFAGQGIVWECLGFSGIR
GYNTGGCIHFVINNQIGFTTSPQFARSSPYPSDVAKGVQAPILHVNGDDPEAVTFACKIA
IEFRTKFGRDIVIDMWCYRRFGHNEGDEPSFTQPLMYAAIKKHPKVSDIYGARLITEGVV
DDAWIQAKRSEYDSFLEGEFTAAKTYEPNKADWFGGRWQGLASPADPENARRNVDTAIDR
KLFDSLGRILTKVPEDLKIHKTLGRVLDAKKAMFDTGENFDWATGEALAYGSLVSEGYNV
RLSGQDSGRGTFSQRHAVWVDQETERRYIPLTTVPHGEFEVLDSPLSEYGVLGFEYGYAM
ADPKSLVLWEGQFGDFANGAQIMIDQFIASGEAKWLRANGLVMLLPHGYEGQGPEHSSAR
LERFLQLCAGDNIQVCNITTPANYFHVLRRQMLRPFRKPMVIMTPKSLLRHKMAVSSAEE
FLGDQHFMRIKSDTNAPADNDVKRLVLCSGKVAFDLIEARDAAGDKNTSIVRIEQLYPFP
NEPLTVRLKKMKNLESVIWAQEEPKNNGSWFFVESLIEQSLKDAGFANMRPIYAGREASA
SPATGLASRHKQQQETLIAEALGHRG
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatttcactccagatataaatttgaatgaagctcaggctgggccaagctggcaa
aataaggggtggccggcggccatgctggatgatttgaccgtcgcgcttgacccaacccaa
atggcggttgaggtgaaggcggcggcggccaagcgcggcgaggcaatgtcagagcaatcg
gtgttggaggctgcgggcgatagtatccgcgcgatgatgttaatccgcacttaccgtgtg
cgcgggcatttggcggcgaatcttgacccgctgggcctgcatcaacgtgaattgccagag
gatttgcggtccgaatatcatggattttccgatgctgatttggataaaaaagtctatctt
ggcgggacaatgggccttgaatatgcaacggtaagggagcttatcgacctgcttcgtgca
aattattgcggcaatgtcggattggaatatatgcatatttccgacattgaggaacgccgt
ttcctacaagaacgtatggagggcaaagaggccaatatcgaatttacgcccgagggtaaa
aaggcgattttgtccaaagttatccaaggcgaagtttatgaaagctttttgggtaaaaaa
tatgtggggacaaagcgtttcggcctagacggtggtgaggcgatgctgcccgcattggaa
gcggtcattaaatatggtggccaatatggcgtgcgcgaaattgtatatggcatggcgcat
cgtggccgtttgaacattttggccaatgtgatggccaaaccctatcatgttatttttcac
gaattttccggcggcagttcaaatcctgatgaagtgggcggttcgggcgatgtgaaatat
catcttggcacatcaaccgaccgtgaatttgacggtatcaatgtgcatatgtcgcttgtc
cccaatccatcgcatttggaggcggtgaaccccgttgttttgggcaaggtgcgcgcacag
caagtgcaccgtcaagataccaaaaaacatgccgaagtattgcccgtgttaatccatggt
gatgccgcctttgcggggcaaggcattgtttgggaatgtttaggcttttcggggattcgc
ggatataataccggcggctgtatccattttgtgattaacaaccaaattggtttcaccacc
agcccgcaatttgcgcgttcctccccctatccatcggacgtggcaaagggtgtgcaggca
ccaattttacacgtaaatggcgatgatccagaggcggtgacctttgcttgtaaaattgcg
attgaatttcgcaccaaatttggccgcgatattgttatcgacatgtggtgctatcgccgc
tttggccataatgaaggggatgagcccagctttacccaaccgttaatgtatgccgcgatt
aaaaaacatccaaaggttagcgatatttacggtgcacgtttaataaccgaaggcgttgtg
gatgatgcatggatacaggctaagcgcagcgaatatgacagctttttggaaggcgaattt
accgccgccaaaacatatgaaccaaataaggctgattggtttgggggccgttggcagggg
cttgcatctcccgctgatccggaaaatgcgcggcgcaatgtggacactgcaattgaccgt
aaattattcgacagcttgggccggattttaaccaaagttcccgaagatttgaaaattcac
aaaacattgggccgcgtgttggatgccaaaaaagcaatgtttgacacgggcgaaaatttt
gattgggcaacgggcgaggctttggcctatggcagcttggtttccgagggatataatgtg
cgtttgtcgggccaagatagcggtcgcggcacattcagccagcgccatgccgtttgggtt
gatcaggaaacggagcgccgttacatcccgctaaccaccgttccacatggtgagtttgag
gtgttggacagcccattatccgaatatggcgttttgggctttgaatatggctatgccatg
gccgaccccaaatcattggtattatgggaaggacaatttggcgattttgccaatggcgcc
caaattatgattgaccaatttattgcctcgggcgaggcgaaatggcttcgtgccaatggt
ttggtcatgttgctaccccatggatatgaaggacaaggaccggaacatagctcggcccga
ttggaacgtttcctgcaattatgtgcgggcgataatattcaggtctgcaatattaccacc
cctgccaattatttccacgtattgcgccgccaaatgctgcgtccatttcgtaaaccaatg
gtgattatgacaccaaaatcgctgctccgccataaaatggcagtgtccagcgcggaagaa
tttttgggtgaccaacattttatgcggattaaatccgacaccaatgccccagcggataat
gatgtaaagcgccttgtcctttgttcgggtaaggttgcgtttgatttgattgaggcgcgg
gatgcggcaggggataaaaatacatccattgttcgcattgaacagctttatcccttcccc
aatgaaccattaacggtccgcctgaaaaagatgaaaaaccttgaatcggttatttgggca
caggaagaaccaaaaaataatggcagctggttctttgttgaatcattgattgagcaaagt
ttgaaagatgcaggttttgccaatatgcggcccatttatgcggggcgtgaggcatctgca
tcgcccgcaaccggtttggcatcacgtcataaacaacaacaagaaaccctgattgctgag
gctttggggcatagaggttaa
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