Sphingorhabdus lutea: LPB140_09445
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Entry
LPB140_09445 CDS
T04602
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00300
Lysine biosynthesis
sphl00550
Peptidoglycan biosynthesis
sphl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPB140_09445
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LPB140_09445
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphl01011
]
LPB140_09445
Enzymes [BR:
sphl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LPB140_09445
Peptidoglycan biosynthesis and degradation proteins [BR:
sphl01011
]
Precursor biosynthesis
Amino acid ligase
LPB140_09445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
APG62976
UniProt:
A0A1L3JCW7
LinkDB
All DBs
Position
complement(1993950..1995416)
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AA seq
488 aa
AA seq
DB search
MRLGALLNSAEILVPAHAVTTQILDQRVSGFAIDNRKIAKDNIFGAFRGAKFNGEDFIAD
AIGAGAIAIVAHPDAKVEGALHIKSDEPRRTFALLAALYFKPFPPMVAAVTGTNGKTSNV
ELTRQLWRMLGFHAASIGTLGITTADEQVKTGLTTPDIVTFLNNLSGLSREGISHAIFEA
SSHGLDQYRSEGPKVSIAAFTNFTRDHLDYHGTMEEYFRAKMRLFEQVLDEDGVAVIWAD
DPSSGKVIDIVKKRGIRMITVGEAGKSIHILKREPTQLGQKLTLEVQGQEAQIMLPLIGA
YQAANALTSMAIVLASGAKLDDLIPLLGRLQPVRGRLERAAISRSGAPIYVDYAHTPDAL
EAAIAALRPHVSGKLHLVFGAGGDRDMGKRKPMGEIAAKFADNIIITDDNPRGEDPASIR
AAILEGAPQAANIADRRDAIATAIAAANGNDIILIAGKGHENGQIYGRGDDMTIHPFDDV
EVARECAI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttggggccttgcttaatagcgcggaaattttggttccagcacatgctgtaacg
acgcagatattggatcaacgcgtcagcggatttgccattgataatcgcaaaattgccaag
gataatattttcggcgcgtttcgcggtgctaaatttaatggcgaagattttatcgccgat
gcaattggcgcaggggcgattgccattgtcgcgcatcccgatgcaaaggtggaaggtgct
ctgcatattaaaagcgatgagccaaggcggacctttgctttgcttgcagcattatatttt
aaaccatttccgccaatggttgcggcggtgacgggcacaaatggcaaaacatcaaatgtt
gaattaacgcgccagctttggcggatgttgggctttcatgctgcctccattggcacattg
ggcattaccaccgccgatgaacaggtgaaaaccggattgaccacgccggatattgtaaca
tttttaaacaatctctccggcctttcgcgggaggggataagccatgctatatttgaagca
tccagccatgggttggaccaatatcgcagcgaagggccaaaggtcagcatcgccgccttt
accaattttacccgtgatcatttggattatcatggcacgatggaggaatattttcgtgcc
aaaatgcggttgtttgaacaggttttggatgaagatggcgttgcggtgatttgggccgat
gatccatcatcaggcaaggttatagatattgtcaaaaaacgcggcatccgcatgattacc
gtgggtgaggcagggaaatccattcatatcttgaaaagagaaccgacccagcttggccaa
aaattaacgcttgaggtacaggggcaagaggcacaaatcatgctccccctaattggtgca
tatcaggcggcaaatgcgttaacatccatggcgattgtgctggccagtggggcaaagctg
gatgatttaatccccctattgggcaggttgcaacccgtaaggggcaggttggagcgcgcc
gcgataagccgatctggggcgccaatttatgttgattatgcacatacgcccgatgcgttg
gaggcggcaattgcggcgctgcgcccgcatgtcagcggcaaattacatttggtatttggc
gcgggcggcgaccgcgatatgggtaaacgaaagccaatgggtgaaattgcagcaaaattc
gccgataatataattattactgatgataatccgcgtggggaagatcccgcatccatcagg
gcggcaatattggagggcgcaccacaggcggcaaatattgccgatcggcgcgatgcaatc
gccactgcaatcgcagcggccaatggaaatgacattattttaattgctggcaaagggcat
gaaaatggccaaatttacgggcgcggtgatgatatgactattcacccatttgacgatgtc
gaagtcgcgcgggagtgtgcgatatga
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