Sphingorhabdus lutea: LPB140_11340
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Entry
LPB140_11340 CDS
T04602
Name
(GenBank) glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl00220
Arginine biosynthesis
sphl00250
Alanine, aspartate and glutamate metabolism
sphl00430
Taurine and hypotaurine metabolism
sphl00910
Nitrogen metabolism
sphl01100
Metabolic pathways
sphl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LPB140_11340
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LPB140_11340
00220 Arginine biosynthesis
LPB140_11340
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
LPB140_11340
Enzymes [BR:
sphl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
LPB140_11340
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT3
GDH_HM3
GDH_HM1
GDH_ACT2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
APG63278
UniProt:
A0A1L3JDQ5
LinkDB
All DBs
Position
complement(2389360..2394060)
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AA seq
1566 aa
AA seq
DB search
MSQKIVEQDINKDLLSQTIASFLDHALPGENDGFDENSAKEAALFALNLGLVRDDNRPLV
AVETFTNNAGRLALRIAIINDDMPFIVDSVSAALGNAGLEIERLIHPVLHLVRDNDGRLS
SIAGTRADLGKTMEGHSRESVIYIEADRVDAAKRQNLKIILEQVLGDVRGAVGDWPNMVD
ILRADAKNIRDSEAAALINWFADGQMTILAHEIVDNKGKVSAKKGIAHSIDGSILSLPSV
NLALKHLAQNPKTDLLVLKSNRSSTVHRSALLDLLVVANRNAKGDVQSLSITAGLWTSAA
LAEVPEDVPILRQRQSELLNKFGFDPQGHAGKALTHSLTSLPHDLLVSLKPEDLERITLS
AMSLSDRPRPKLIAVRSPLGRHLSVFVWLQRDDVSTNMRRIIGDMVCEAAQAKLLSWTIG
LEEGGLALLRYTLDLPDRSIRVDEDALDAKLRLMVRGWEPAVEGYLAEQSDAKRAAAIVS
RFGPMVPVEYRTRHGIEQSAEDLLRMVQMEREGKKNVRIYLREGDDENRLRLKIYNLDGS
LHLSDAVPALENFGFSVVEETPTELVSQNDEGEKKSFGYIHDFLLGTNQVASQDLAARAE
ILEQAIVDVLEGAAEDDRFNKLITVAGLEPQAVIWFRAWFRYLRQAGLSYGLLTFVDALN
KVPHIAAALAHLFTLRHDPNWSGDREVESKAICKKIQSDLAQVSAIDDDRIIRLLNSLIL
AVLRTNAFAPSAQQALAFKIDSSKIPILPKPLPWREVWVYSPRVEGIHLRAGPVARGGLR
WSDRRDDFRTEVLGLMKAQRVKNAVIVPTGAKGGFYPKMLPNMADDRDKWFEEGKESYRI
FIRSLLSLTDNIVDDKIVHPDAIVRHDADDPYFVVAADKGTATFSDVANALAAERGFWLG
DAFASGGSYGYDHKAMGITAKGAWVSVQRHFLEMGMDVQKDESRVIGIGDMSGDVFGNGM
LLSKAIKLVAAFDHRHIFIDPNPDAAAAWKERKRMFDLPRSSWEDYDPKLISKGGGIFPR
SAKSIKLTPEIRNMLNIEEKEIEPSALMTLLLKAPVDLLWMGGIGTYIKARSENHVEVGD
PSNDAIRVNAEDIQAKIIGEGANLGVTQAARISYALKGGRINTDFIDNSAGVDCSDNEVN
IKIPINRLMVAGDLAEAKRNKLLVDMTDAVSELVLDDNRAQALALSIAQADGAEAMASYL
RLIERFEGEGRLDRQVEGIAANDDLQRRSAEGFGLMRPELAVILSTSKIALQDAIEGIDV
ADDAAMDSELLAAFPPMLVKAHKDALLSHRLRTEIVATKIANRIINRMGMLHPFELAEEE
GAPLAEVAKAYIIIERLFNLTAIFDDITTAKVDEETRLALYTRLAKATRLHMADLMRTDL
LHRPIGEILEILSGQISKLQQNVDDILTQDARIEAEQSIISLQQSGAPTKLVQILLGLEK
VDGAIGIVNLALNRELTPEDVAQAFVKIGDMLGLGWAQRMAVQMQPSDPWEKLLVAGIAR
DLQQMRLDFLNRSRGDMDGFIERWGDMHLARIQQFKHLVTQARQGGMLSLAMLAQIAGQA
RVLLNR
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaaaattgtcgagcaagatataaataaagatcttctttcacaaacaatagct
tcattccttgaccatgcattgccaggagagaatgacggatttgatgaaaatagtgcaaag
gaagcggcgttattcgcgttaaatctggggctggttcgtgatgataatcggcccttggtt
gcggtggaaacatttaccaataatgccggacgcttggcattgcgtatcgccattataaat
gacgacatgcccttcattgtggattcagtgtcggcggcattgggcaatgcggggttggag
atagagcgtttaatccatccagttttgcatttggtgcgcgataatgatgggcggttatca
tccattgccggaacgcgtgcggaccttggcaaaacgatggaggggcatagccgtgagtcg
gtaatttatatagaggcggaccgtgtggacgcggcaaaaaggcaaaatttgaaaatcatc
cttgaacaggttctgggcgatgtgcgcggggcggttggcgattggcccaatatggtggat
attttgcgcgccgatgccaaaaatattcgcgatagtgaggcagcggccttaatcaattgg
tttgccgatggccaaatgaccatattggcgcatgaaattgttgataataaggggaaggtt
tcggcgaaaaagggtattgcccattcgattgacgggtcaattttatcattgcccagtgtc
aatcttgcgttgaagcatttggcgcaaaatcccaaaaccgatttattggtattaaaatct
aaccgttcatcgacggtccatcggtctgctttattggatttattggtggtggcgaaccgc
aatgcaaagggtgatgtgcaaagcctgtccatcacggcgggtttgtggaccagcgcggca
ttggccgaagtgccagaggatgtgcccattttgcgccaacggcaaagcgaattattgaac
aaatttggctttgatccgcaaggccatgcgggcaaggcattgacgcatagtttgaccagc
ctgccgcatgatttattggtgtcgttaaagccagaggatttagagcgcattacattaagt
gcaatgtcattatcggacaggccgcgccccaaattaatcgcggtgcgttcaccattgggc
cgacatttgtcggtttttgtgtggttgcaacgcgatgatgtgtccaccaatatgcgccgg
attatcggggatatggtgtgcgaagcggcgcaggcaaaattattaagctggaccattggg
ttggaagaaggtggccttgccctattaagatatacgttggatttacccgaccgttcaatc
cgcgtagatgaagatgcgctggacgcgaaattgcgcctgatggttcgcggctgggaaccg
gcggttgagggatatttggccgaacaaagcgacgcgaaacgggccgcggccattgtatcg
cgctttggcccgatggtgccggtggaatatcgcacccgccacggtattgaacaatcggcc
gaagatttgctgcgcatggtgcaaatggaacgcgagggcaaaaaaaatgtccgcatttat
ttgcgcgagggtgatgatgaaaatcgcctgcggttgaaaatttataatttggatgggtca
ttgcatttaagcgatgccgtgcccgcgcttgaaaattttggattttccgtggtggaggaa
acccccaccgaattggtcagccaaaatgacgagggcgagaaaaaaagctttggctatatt
catgatttcctattggggactaatcaagttgcgtcacaggatttggccgcaagggcagag
attttggaacaggccattgtcgatgtgttggaaggcgcggcagaggatgatcgttttaac
aagctgattaccgttgctggattagagccacaggcggttatttggtttcgcgcatggttt
cgttatttgcgccaggcggggcttagctatggtttgttaacctttgtcgatgcattgaac
aaagtgccgcatattgccgccgcattggcccatttattcaccctgcgtcatgatccaaat
tggtcaggcgatcgggaggtagaaagcaaagcaatttgcaaaaaaatacaatcagatttg
gcacaggtaagcgcgattgacgatgaccggattatccgtttgctcaacagtttgattttg
gctgtgctgcgtaccaatgcctttgccccctccgcacagcaggctttggcatttaaaatt
gacagcagcaaaattcccattttgccaaagccgctaccatggcgggaggtatgggtttat
tcaccgcgcgtggagggcattcatttgcgtgcagggccagtggcgcggggcgggcttcgc
tggtccgacaggcgcgatgattttagaacagaggtgcttggcctgatgaaggcgcagcgg
gtgaaaaatgcggtcattgtgccaacgggcgcaaagggcggattttatcccaaaatgttg
cctaatatggccgatgatcgtgacaagtggtttgaggagggcaaggaatcttaccgtatc
ttcatccgcagcttgcttagcctaaccgacaatattgtggatgataaaattgtccatccc
gatgcgattgtgcgccatgatgcggacgatccatattttgtggtcgcggcggataaaggc
acagcgacattttccgacgtggctaatgcattggcggcggagcgtggtttctggctgggc
gatgcctttgccagcggtgggtcatatggttatgatcataaggcgatgggcattacggca
aagggtgcatgggtttcggtgcagcgccatttccttgaaatgggaatggatgtgcaaaaa
gatgaaagccgcgtcattggcattggcgacatgtcgggcgatgtgtttggcaatggcatg
ttgttaagcaaggcgattaaattggttgcggcatttgaccatcgccatattttcatcgac
cccaatcccgatgcggcggcagcgtggaaagaacgcaaacgcatgtttgaccttccccgt
tccagttgggaagattatgatccaaagctgatttcaaagggtggcgggattttcccacgc
agcgcgaaaagcattaaattaacgcccgaaatccgcaatatgttaaatattgaggaaaag
gaaattgaaccaagcgcgttaatgaccttattattaaaagcaccagttgacctgttatgg
atgggcggcattggcacatatattaaggcgcggagcgaaaatcatgtcgaggtgggcgat
ccatccaatgatgccattcgggtgaatgcagaggatattcaagcgaaaatcattggcgaa
ggcgcgaatttgggcgtgacccaggccgcgcgcatatcctatgctttaaaaggcgggcgt
atcaacaccgactttattgataatagcgcgggggttgattgttcggataatgaagtgaat
atcaaaatcccgattaaccgtttaatggttgcgggtgatttggccgaggcaaagcgcaat
aaattattggtcgatatgaccgatgcggtcagcgaattggtgcttgatgataatcgtgcg
caggcgctggctttatccattgcacaggccgatggggcggaggctatggcgtcttatctt
cgtttaatcgaacgatttgagggtgagggccgccttgaccgtcaggtagagggcattgcc
gccaatgatgatttgcagcggcgcagcgccgaaggatttggtttgatgcggcctgaattg
gcggttattttatcaacatcaaaaatcgccctgcaagatgcgatagagggcattgatgtt
gccgatgatgcggcaatggacagcgaattattggctgcatttccgcccatgctggtaaag
gcgcataaagatgcgttattatcccaccggttgcggaccgaaattgtcgcgaccaaaatc
gccaatcggattattaaccgtatggggatgttgcatccatttgaacttgccgaggaagag
ggcgcaccccttgccgaggtggccaaggcatatattatcatcgaaagattgtttaattta
accgcgatttttgatgacatcaccaccgcaaaggtggatgaggaaacgcgattggcgctt
tatactagattggccaaggcgacacgcctgcacatggccgatttaatgcggaccgattta
ttacatcgtcccattggggaaattttggagattttgtctgggcaaatttctaaattgcaa
caaaatgtcgatgatattttgacccaagacgcgcgtatagaggcagaacaaagcattatt
tccctgcagcaatctggtgcgccgacaaaattggtgcaaatattattgggtctggaaaaa
gtggatggggcaattggcattgtcaatttggcgctgaaccgtgaactaacccccgaagat
gtggcgcaggcatttgtgaaaattggcgatatgcttggccttggttgggcacagcgtatg
gcggtgcagatgcagccttccgacccgtgggaaaaattattggttgcagggattgcgcgt
gatttacaacaaatgcggcttgattttttaaaccgttcacgcggcgatatggacggattt
attgaacgttggggggatatgcaccttgcacggattcagcaatttaaacatcttgtcaca
caggcacgccaaggcggtatgttaagccttgccatgttggcgcaaattgcgggacaggca
cgggtattgcttaatcgttaa
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integrated database retrieval system