KEGG   Sphingomonas sp. MM-1: G432_00115
Entry
G432_00115        CDS       T02498                                 
Name
(GenBank) endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
sphm  Sphingomonas sp. MM-1
Pathway
sphm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sphm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    G432_00115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphm03400]
    G432_00115
Enzymes [BR:sphm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     G432_00115
DNA repair and recombination proteins [BR:sphm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     G432_00115
 Prokaryotic type
     G432_00115
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH Ogg-HhH HHH_5 DUF7024
Other DBs
NCBI-ProteinID: AGH47753
UniProt: M4RYK7
LinkDB
Position
complement(24116..24769)
AA seq 217 aa
MKRDAIFEFYRRLAEANPAPETELQYTNPYTLLVAVALSAQATDVGVNKATRRLFAEVST
PQQMLDLGEEGLRDHIKTIGLFNTKAKNVIAAARILVDRHGGEVPRDRAALEELPGVGRK
TANVVMNVAFGADTIAVDTHIFRVANRTGLAPGKTPLAVELKLEKVTPAPFRTHAHHWLI
LHGRYICKARRPECWRCPVADLCAFKPKTPPPAEAKG
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaagcgcgacgccatcttcgaattctaccggcggctggcggaggccaatccggcgccc
gaaaccgagcttcaatataccaatccctatacgctgctggtcgcggtcgccctttccgcg
caggcgaccgacgtcggcgtcaacaaggcgacgcgccggctgttcgccgaagtctcgacc
ccacagcagatgctggacctgggcgaggaaggcctgcgcgatcacatcaagacgatcggc
ctgttcaacaccaaggcgaagaacgtcatcgccgccgcccgcatcctcgtcgatcgccat
ggcggcgaggtgccacgggaccgcgccgcgctggaagaactgcccggcgtcggccgcaag
accgccaatgtggtgatgaacgtcgccttcggcgcagatacgatcgcggtcgatacccac
atcttccgcgtggccaaccgcaccggcctcgctcccggcaagacgccgctcgccgtcgag
ctcaagctggaaaaggtcacgcccgcgccctttcgcacccatgctcaccactggttaatc
ctgcatggccgctatatctgcaaggcgcggaggccggaatgctggcgctgcccggttgcc
gatctgtgcgcgttcaagccgaagacgccgccgccggccgaggccaagggctga

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