Sphingopyxis sp. 113P3: LH20_00480
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Entry
LH20_00480 CDS
T04069
Name
(GenBank) glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00220
Arginine biosynthesis
sphp00250
Alanine, aspartate and glutamate metabolism
sphp00430
Taurine and hypotaurine metabolism
sphp00910
Nitrogen metabolism
sphp01100
Metabolic pathways
sphp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LH20_00480
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LH20_00480
00220 Arginine biosynthesis
LH20_00480
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
LH20_00480
Enzymes [BR:
sphp01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
LH20_00480
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT3
GDH_HM3
GDH_HM2
GDH_HM1
GDH_ACT2
ELFV_dehydrog
EF-hand_3
Motif
Other DBs
NCBI-ProteinID:
ALC10426
UniProt:
A0A0M4CSG6
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All DBs
Position
107730..112430
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AA seq
1566 aa
AA seq
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MPSQPESDASSASVPAVPRKIQSAYLAALRGSALPGEGDDMDEAALADASRFIAAAALDR
PPGAPVLSLEPMAADGTDRRMRLAIVNDDMPFLVDSTSQVAAAQGLVVHRILHPVVSATR
DAKGHLTDAGAPEQGTQNRESVIYMELERGDARARRRLLDAIEAALADVRAAVSDWKAMR
AAMLADAAMRTDGEGAELLRWFEGGAMTQLGHEWRGRDGAADEPLGICASSQGQLLSPEA
LAAAFAWFDGGGSSPLLIKSNRLSAVHRRVLLDLVIIPELKGRTAERLSIHAGLWTSQAL
SMPPAKVPVLRAQLSALMTKFGFDPAGHAGKALAHALTALPHDLLIAFDAASLERLALTS
MSITDRPRPKLVTVRSALGRHLFVFVWLPRDEVSTGRRLAIEGMLAREARAGVIGWTMVL
EDGGAALLRYTLDLRSGGVIPDEEALGTMLEQMVRGWQPEVEAALARRGDAGRAAALAAR
FAPLFPPNYRNLYDPEEAARDILRLRDLDAAHPRGVRLALKSLDGDDRLRLKVYSLAGAL
ALSDVVPALEHFGFEVLEEIPTALSYGRPSADGGEQPAFIHDFTLRVPTAVDEAALLPHA
EVIEGAIAAVLEGSAEDDAFNELMLVTQTDPQAIVWLRAWFRYLRQGGSSYGMDTVVAAL
RHAPTLTRAMIDRFRALHDPAAHDPKRAAELDAEIQAGFAGIKSIDDDRILRRFNAVIGA
TLRTNAFASAAEEALAFKIDSSKVPGLPKPLPWREVWVYSPRVEGIHLRAGPVARGGLRW
SDRRDDFRTEILGLMKAQRVKNAVIVPTGAKGGFYPKALPNPAIDRDAWFAEGTECYRIF
IRSLLSITDNIVAGKVVHPRDVVIHDGEDPYFVVAADKGTATFSDVANGLAMERDFWLGD
AFASGGSKGYDHKAMGITAKGAWVSVQRHFAEMGVDVQTDTIRVAGCGDMSGDVFGNGML
LSKAIQLVAAFDHRHIFLDPHPDPAKSWKERARLFNLPRSSWDDYDKKLISKGGGVFPRS
QKSIPLSAEVKAMLDLNVDEIDPAGLISAILKAPVDLLWFGGIGTYLKAASQNNAEVGDP
ANDALRVDAEDLRARVVGEGANLGVTQAARIAFSQRGGRINTDFIDNSAGVDCSDNEVNI
KIALNREMIEGRLAQDDRDALLLRMTDDVAGLVLEDNRLQALALSIAEKGGAGAVPSLVR
LMETFESSGRLDRKVEGLAANDELLRRAQEGRGLARPELAVLLSTAKLALQDAIEASSLP
DDPMLDGDLAAAFPAEMQRDYAEAIAGHQLRREIIATKLANRIINRMGVVHPFELVEEEG
CSLADVAAAFVTVEKLLDMREIWEALDTAKIDEAIRLSLFAQAASAMASQMADLLRIAPT
GGQPGVLVARLEPGVDRLTARVDGLLSESVRRQWDMLSQQLLDAGAPEGLAAAVVRLFKL
DGAIGIVDLAERRGDDEVAVTHAFTHLGEALGLDWAQTLAAHMSPTDPWERLLVNSLARD
FQQMRLSFLAGLKGDDLDGAVTRWLGEQAPRVAQFRSTVDRARTIPTPNGAMLSHLAGQA
RGLLGR
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtcaaccggaatcggacgcttcctccgcctccgtccccgctgttcccagaaaa
atccagtccgcttaccttgctgccctgcgcggcagcgcccttcccggcgagggcgacgac
atggacgaagcggcgcttgccgacgcgagccggttcatcgccgccgcggcactcgatcgc
ccccccggcgcccccgtcctctcgctcgaacccatggccgccgacgggaccgaccggcgg
atgcgtcttgccatcgtcaatgacgacatgcccttcctcgtcgattcgacctcgcaggtc
gccgcggcgcaggggctggtcgtgcaccgcatcctgcacccggtcgtttcggcaacccgt
gatgccaagggccacctcaccgatgcgggcgcgccggagcaaggcacgcagaaccgcgaa
tcggtcatctatatggaactggagcgcggcgacgcgcgcgcacgtcgccgtctgctcgat
gcgatcgaggccgcgcttgccgacgtgcgcgctgcggtttccgactggaaggcgatgcgc
gcggccatgctcgccgacgccgcgatgcgtactgacggcgagggtgctgaactgctgcgc
tggttcgaaggcggcgccatgacgcagctcggacacgaatggcgtggccgcgacggcgcg
gcggacgagccgctcggcatttgcgcatcgagccaaggccaactgctctcgcccgaagcc
ctcgcggctgcgtttgcgtggttcgacggtggcgggtcgagcccgctgctcatcaagtcg
aaccggctctcggcggtgcaccgccgtgttctgctcgacctcgtcatcattcctgaactc
aagggccgaacggccgagcggctgtcgatccacgccgggctgtggaccagccaggcactg
tcgatgccacccgcgaaagtcccggtacttcgcgcgcagctgtcggcgctgatgacgaaa
ttcggcttcgatcccgcaggccacgcgggcaaggctctcgcacacgccctgaccgcgctg
ccccacgacctgctgattgccttcgatgcggcttccctcgagagacttgcgctcacctcc
atgtcgattaccgaccggccccggccgaagctggtcacggtgcgcagcgcgctcggccgg
cacttgtttgtctttgtctggctgccgcgcgacgaggtatcgaccggccgccgactggcg
atcgagggcatgctggcgcgcgaagcccgggcgggtgtcatcggttggacgatggtgctc
gaggacggcggcgccgcgctgctccgttatacgctcgaccttcgcagcggcggtgtcatc
cccgacgaagaggcacttggcaccatgcttgaacagatggtgcgcgggtggcagcccgag
gtcgaggcggcgctggccaggcgcggcgacgccggccgggctgcggcgctcgccgcgcgc
tttgcgccgctcttcccccccaattatcgcaatctctatgatcctgaagaggccgcacgc
gacatattgcggctgcgcgacctcgatgctgcgcatccgcgcggggtgcgccttgcactc
aagagcctcgacggcgacgaccggctgcgcctcaaggtctacagcctcgcgggggcgctt
gcgctttccgacgtggttcccgccctcgagcatttcggcttcgaggtgcttgaggaaatt
ccgacggcactgagctatggtcggccgtccgccgacggcggggagcagcccgccttcatc
cacgatttcaccttgcgggtgccaaccgcggtcgacgaggcggcgttgctcccgcacgcc
gaggtgatcgagggcgcgattgctgcggtgctcgaaggatcggccgaggacgacgcattc
aacgagctgatgctcgtgacgcagaccgatccgcaggcgatcgtctggctgcgcgcgtgg
tttcgctatctgcgtcagggcgggtcgagctatggcatggacacggttgtggccgcgctg
cgacacgcgcccacgctgacccgggcaatgatcgaccggtttcgcgcgctgcacgacccg
gcggcgcacgacccgaagcgcgctgcggaactcgacgccgagatccaggcaggctttgca
ggcatcaagtcgatcgacgatgaccggatcttgcgccggttcaatgcggtgatcggtgcg
acgctgcgcaccaacgctttcgcgtctgccgccgaggaggcgctggcgttcaagatcgac
agcagcaaggtcccgggtctgcccaagccgctgccgtggcgcgaggtgtgggtctattcg
ccgcgcgtcgagggtattcaccttcgcgccggccccgtcgcgcggggcgggctgcgctgg
tcggaccggcgcgacgacttccgcacggagatcctcgggttgatgaaggcgcagcgcgtc
aagaatgccgtgatcgtgccgacgggcgcgaagggcggcttctaccccaaggcgctccca
aatccggcgatcgaccgcgacgcctggtttgcggaagggaccgaatgctaccgcatcttc
atccgctccttgctttcgatcaccgacaatatcgtcgcggggaaggtcgtgcacccccgg
gacgtggtcatccacgacggcgaggatccctatttcgtcgtcgcggccgacaagggtacc
gcgaccttctcggacgtggcgaacggcctcgcaatggagcgcgacttctggctgggcgat
gcctttgcgagcggtggatcgaagggctatgatcacaaggcgatgggcatcaccgccaag
ggtgcgtgggtgtcggtgcagcgccatttcgccgaaatgggcgtcgacgtgcagaccgac
acgatccgcgtcgccggctgcggcgacatgtcgggcgatgtgttcggcaatggcatgctg
ctttcaaaggcgatccagctcgtggcggcgttcgatcatcggcacatcttcctcgacccg
caccccgacccggcgaagagctggaaggagcgcgcacgtttgttcaatctgccgcggtcg
agctgggacgattatgacaagaagctgatctccaagggcggcggcgtgttcccgcgcagc
cagaagagcattccgctcagtgccgaggtcaaggcgatgctggacctcaatgtcgacgag
atcgatcccgccgggctgatctcggcgatcctcaaggcgccggtcgacctcctgtggttc
ggcgggatcggcacctatctgaaggccgcgagccagaataatgccgaggttggcgatccc
gccaacgacgcgctgcgcgtcgatgccgaagacctgcgcgcccgggtggtcggcgaaggt
gcgaacctcggcgtcacgcaggccgcgcgcattgccttttcgcagcgcggcggccgcatc
aataccgacttcatcgacaatagcgcgggcgttgattgctcggacaatgaggtcaacatc
aagatcgcgctcaatcgcgagatgattgaagggcggctagcgcaggacgaccgcgacgcg
ttgctccttcgcatgaccgacgatgtcgcggggttggtgctcgaggacaatcgcctccag
gcgctcgcgctgtcgatcgccgaaaagggcggagcgggcgcggtgccctcgctggtacgg
ctgatggaaacgttcgagagcagcggccggctcgaccgcaaggtggaggggcttgccgcc
aacgatgaactgctgcgccgcgcgcaggaagggcgcggcttggcgcgtcccgaactggcg
gtgctgctgtcgaccgccaagctggcgctgcaggacgcaatcgaggcgagcagcctgccc
gacgatcctatgctggacggcgatctcgccgcggccttcccagccgaaatgcagcgcgac
tatgcggaggcaattgccgggcatcagctacgccgcgaaatcattgcgaccaagctcgcc
aaccgcatcatcaaccgcatgggcgtcgtccatccgttcgagctggtcgaggaagaaggc
tgttcgctcgccgacgtcgctgcggcgttcgtgacggtcgaaaagctgctcgacatgcgc
gagatctgggaggcgctcgacacggcgaagatcgacgaagcgatccgcctgtcgctgttc
gcccaggcggcctcggcgatggcgtcgcaaatggccgacctgctgcgcatcgcgccgacg
ggagggcagccgggcgtgctcgtcgcgcggctcgagcccggcgtcgatcggctcaccgcg
cgcgtcgacggcctgctcagcgaatcggtgcgccgccagtgggacatgctgagtcagcag
ctgctcgacgcgggcgcgcccgagggactcgccgctgcggtggtgcggctgttcaagctc
gacggcgcgatcggcattgtcgatcttgctgagcggcgcggcgatgacgaagtggcggtg
actcatgccttcacccatctcggcgaggccttggggctcgactgggcgcagacgcttgcg
gcgcatatgagcccgaccgacccctgggagcggcttctggtgaacagtctggcgcgcgat
tttcagcaaatgcggctgagctttctcgccgggctgaagggtgacgatctcgacggcgcg
gtgacccggtggctcggcgaacaggcgccgcgcgtcgcgcagttccgctcgaccgtcgac
cgcgcccggaccatcccgacccccaatggtgcgatgctctcgcaccttgcggggcaggca
cgcgggcttctgggacggtag
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