Sphingopyxis sp. 113P3: LH20_14540
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Entry
LH20_14540 CDS
T04069
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00300
Lysine biosynthesis
sphp00550
Peptidoglycan biosynthesis
sphp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LH20_14540
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LH20_14540
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphp01011
]
LH20_14540
Enzymes [BR:
sphp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LH20_14540
Peptidoglycan biosynthesis and degradation proteins [BR:
sphp01011
]
Precursor biosynthesis
Amino acid ligase
LH20_14540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ALC13171
UniProt:
A0A0M4CVS6
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Position
complement(2928723..2930162)
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AA seq
479 aa
AA seq
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MRLAALIDTPAPLNADPVVTGLAIDHRKVAPGTIFGAFAGAKFNGEDFIQAAVGAGAIAV
VARPEARVEGAVHIADANPRRAFAQIAARFFHRFPATCVAVTGTNGKTSTVEMTRQLWRL
AGFNAASVGTLGITTSNERASTGLTTPDIVTFLSNMSGLAAEGVTHAAFEASSHGLDQYR
TEGLPVKAAAFTNLSHDHLDYHGTMEAYLAAKLRLFSEVLEASGTAVVWTDDAYSKRVID
AARARGAALMTVGAEGEALRLVSREPTQLGQSLVIAAGDLTQKVSLPLIGAYQVANALVA
AGLVIATGGDTPLTLANLARLQPVRGRLERAAITRAGAPVYVDYAHTPDAIEAALDALRP
HARGRLILVFGAGGDRDKDKRPEMGRIAALKADHLIITDDNPRGEDPALIRAAIAEAAPG
AEVIGDRRAAIAAAVAAARAEDIVCIAGKGHEQGQIVGAGADMRVIPFDDVAVAREVAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcgcggcgctgatcgacactccggctcctctcaacgccgaccccgtggtcacc
ggcctcgccatcgaccatcgcaaggtcgcgcccggcacgatctttggcgccttcgcgggt
gcgaaattcaacggcgaggatttcattcaggcagctgtcggcgctggcgcgatcgctgtc
gttgcgcggcccgaagcccgcgtagagggcgccgttcacatcgccgatgccaacccccgc
cgggcctttgcccagatcgctgcccgtttcttccaccgctttcccgcaacctgcgtcgcg
gtcaccggcaccaacggcaagacctcgacggttgagatgacccgccagctctggcgattg
gcgggcttcaacgccgcctcggtcggtacgctcgggatcacgacctcgaacgagcgcgcc
tcgaccgggctcaccacgcccgacatcgtcaccttcctttccaacatgtcggggctcgcg
gccgagggggtgacgcatgcggcgttcgaggcctcgagccacggcctcgaccagtatcgc
accgaggggctgccggtgaaggcggctgccttcaccaatctcagccacgatcatctcgat
tatcatggcacgatggaggcctatctcgccgccaagctccggctcttttcggaggtgctc
gaggcgagcggaacggcggtcgtctggaccgacgacgcctattcgaagagggtgatcgat
gcggcgcgcgcgcgcggcgcggcgctgatgacggtgggcgccgaaggcgaggcgcttcgc
ctggtgtcgcgcgagccgacgcagcttggccagtcgcttgtcatcgcagcgggtgatctc
acgcagaaggtcagcctgccattgattggagcctatcaggtcgccaatgcgctcgtcgct
gccggcctcgtcatcgcgaccggcggcgatacgcccctcacgcttgccaatctcgcgcgg
cttcagccggtgcgcgggcgtcttgagcgtgcggcgatcacccgtgcgggcgcgcccgtc
tatgtcgactatgcgcatacccctgacgcaatcgaggctgcgctcgacgcgctacgcccg
catgcgcgcggccggctgatcctggttttcggcgccggcggcgaccgcgacaaggacaaa
cgccctgaaatgggccggatcgcggccctcaaggccgaccacctgatcatcaccgacgac
aatccccgcggcgaggatcccgcgctgatccgggctgccattgccgaggccgcgccgggg
gccgaggtgatcggcgaccgccgcgccgcgattgccgccgcggtcgctgcggcgcgcgcc
gaagacattgtctgcattgccgggaaggggcacgagcaaggccagatcgtgggagcaggc
gccgacatgcgcgttatccccttcgacgatgtcgcggtcgcgcgggaagtggcggcatga
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