Sphingosinicella sp. BN140058: ETR14_20845
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Entry
ETR14_20845 CDS
T05826
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sphs
Sphingosinicella sp. BN140058
Pathway
sphs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ETR14_20845 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphs03400
]
ETR14_20845 (nth)
Enzymes [BR:
sphs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ETR14_20845 (nth)
DNA repair and recombination proteins [BR:
sphs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ETR14_20845 (nth)
Prokaryotic type
ETR14_20845 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QAY80017
UniProt:
A0A4P6FYR0
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All DBs
Position
4612870..4613556
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AA seq
228 aa
AA seq
DB search
MSPEAVAEFYRRLADRTPNPETELEYVNDYTLLVAVVLSAQATDAGVNLATRALFATVNT
PEAMVALGEEGLKAHIKTIGLFNTKAKNVIALSQALIDTHGSRVPADRDALQTLPGVGRK
TANVVMNCAFGAETFAVDTHVFRVSNRTGLAPGKDVDAVEAILDAETPQPWRRDAHHYLI
LHGRYVCKAKKPECWRCVVADLCRYEPKTPPPGGDAEAKVIAAKRGRG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ctgtcgccggaggcggttgcggaattctatcggcgtctcgcggaccgcacgcccaatcct
gaaaccgagctcgaatatgtcaacgactacaccctgctggtggcggtggtgctttccgcg
caggcgaccgacgccggcgtcaatctcgccacgcgtgccttgttcgcgaccgtgaacacg
cccgaagcgatggtcgcgctcggcgaagaagggctgaaggcgcacatcaagacgatcggc
ctgttcaacaccaaggcgaagaacgtcatcgcgctgtcgcaggcgctgatcgacactcat
ggcagccgggtgcccgccgaccgcgatgcgctgcagactttgcccggggtcgggcgcaag
acggcgaacgtggtaatgaactgcgcgttcggcgccgagacgttcgccgtcgacacccat
gtcttccgcgtctccaatcgcaccggtcttgcgcccggcaaggacgtcgatgcggtcgaa
gcgatcctcgatgccgaaactccgcagccgtggcggcgcgacgcgcaccattatctgatc
ctccacggccgctacgtctgcaaggcgaagaagccggaatgctggcgctgcgtggtcgcg
gacctctgccgctacgaacccaagacgccgccgcccggaggcgacgccgaggcgaaggtg
atcgcggccaagcgcgggcgaggctga
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