Sphingobium sp. TKS: K426_05480
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Entry
K426_05480 CDS
T04965
Name
(GenBank) radical SAM protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00790
Folate biosynthesis
spht01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
K426_05480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spht03016
]
K426_05480
Enzymes [BR:
spht01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
K426_05480
Transfer RNA biogenesis [BR:
spht03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
K426_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AMK22048
UniProt:
A0A126RIJ4
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All DBs
Position
1:1081982..1082629
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AA seq
215 aa
AA seq
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MSYAVKEMFLTLQGEGVHAGRRAVFLRFAGCNLWSGREQDRASAICQFCDTDFVGTDGDG
GGKFADADSLADAALAFWGEGREGRYIVLTGGEPMLQIDDALVDALHARGFAIAIESNGT
LPAHPGLDWVCISPKAGSEVVQRSGNELKLVWPQPGLGHSLADVEDMEGWAFDHLLVQPL
DDPDAAKNAQAVVDLVMDRPRWRLSLQSHKYLGLR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgccgtcaaggaaatgttcctgactttgcagggagagggcgtccatgccgga
cgccgcgcggtgttcctgcgctttgccggctgcaatctgtggagcgggcgggagcaggac
cgggcaagcgcgatctgccaattttgcgacacggatttcgtcggcacggatggcgatggc
ggcggcaaatttgccgacgcggacagtctggccgatgcggctctggccttttggggcgag
gggcgggaggggcgctatatcgtgctcaccggcggggagccgatgctccagatcgatgat
gcgctggtcgatgcgctgcatgcgcgcggctttgccatcgcgatcgagagcaacggcact
ttgcccgcgcatcccgggctggactgggtgtgtatcagccccaaggcgggtagcgaggtg
gtccagcgcagcggcaatgagctgaagctggtctggccgcagccggggttagggcacagc
ctggccgatgtcgaggatatggaaggctgggccttcgatcatttgctggtgcagccgctg
gatgaccccgatgcggcgaaaaacgcccaggctgtggtggacctggtgatggacaggccg
cgctggcgcctcagcctccagtcgcacaaatatctggggttgcgataa
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