KEGG   Sphingobium sp. TKS: K426_28600
Entry
K426_28600        CDS       T04965                                 
Name
(GenBank) VirD4 type IV secration protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
spht  Sphingobium sp. TKS
Pathway
spht03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:spht00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    K426_28600
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spht02044]
    K426_28600
Enzymes [BR:spht01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     K426_28600
Secretion system [BR:spht02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   K426_28600
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AMK26615
LinkDB
Position
pTK2:179231..181027
AA seq 598 aa
MSRGATLAIGIPAVLLLLCLTGSIVAWFALGLPAAAYDPLKMPAFFWYYRGDPVVQKGLA
GGMAAGSLLSGLLLYWFVTRKPPLHGAARFAREREIVRHGFRGKDGIVLGKKSGRYLIFE
GNEHCIVEAPTRSGKGIGIVIPNLLSWPGSTVVLDVKRENYDVTAGFRAKHGQAVYLFNP
TEPEGRTARYNPLSYIDRQDADQVIIELQKIATMLFVPPERGEPFWTDSARTAFVGVGAY
LAQADGPFTIGAIYRLMTTGDTRGTFRRILDDRSLRLSAGCRNALADFTSGADNTFAGIV
QTVTSKLSLWLNPRVDAATEDSDFDLRELRMRPMSVYLGVSPDELDRVAPLYNLLFQQLI
DLNVRELPDARTPISVLVLLDEFARLGRAQVIAGAFSYVAGYGIRLLPVIQSRSQLRAVY
GEHVADEIVANCGVEIAFTPKELRVANELSERIGYVGQESVTKSLTIHGILANRSKSMSD
HRRALLLPQELMQFPSDELLLLRGGMPPIRADKIRYYGDRHFTRRLAPPPSVAPIVRRIA
EDEDLPPCVLPDADQLANPDPETFAMDCVVISDFDDILIDVEASERGDRRVGIIEQER
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgagccggggcgcgacgctggcgatcggcattcccgccgtcctcctgctcctgtgtctt
accggctccattgtcgcgtggtttgccctcggccttcccgccgccgcctatgatccgctg
aagatgccagccttcttctggtattatcggggtgaccctgtcgtccaaaaggggctcgcc
ggcggcatggcagccggatcgctgctgtcgggtctgcttctttactggttcgtgacccgc
aagccgccactgcacggcgcggcccgctttgccagggaacgcgagattgtgcgccacggc
ttccgcggcaaggacgggatcgtcctgggcaagaaatccggtcgctacctgattttcgag
ggcaatgaacattgcatcgtcgaagcccccacgcgctcaggtaaaggcattggtatcgtc
atccccaatctgctgagctggcccggctcgaccgtcgtgctcgatgtgaagcgtgagaat
tatgatgtgaccgcaggctttcgcgcgaaacatggccaagccgtctatctgttcaacccg
accgaacccgagggccgtaccgcccgctataacccgctcagctatatcgacaggcaggac
gccgaccaggtcatcatcgagcttcagaagatcgcgaccatgttgttcgtgcctcctgag
cggggtgaacccttctggaccgattccgcgcgcacggcctttgtcggcgtcggcgcctat
ctcgcccaggccgacgggcccttcacgatcggcgccatctaccggctgatgaccacgggc
gatacacggggcactttccgtcggatcctcgacgatcggagtctgcgcctctcggcaggc
tgccgcaacgcgctcgctgatttcacgtcgggcgctgacaacacctttgccggcattgtc
cagacggtcacatccaagctcagcttgtggctcaacccccgggtcgatgcggccaccgag
gatagcgatttcgatctgcgcgaactgcggatgcggcccatgtcggtctatctgggggtg
tcgcccgatgagctggatcgggtggcgccgctctataatctcctgttccaacagctcatc
gacctcaatgtccgcgaattgcctgacgcacgcacgccgatatccgtgctggtgctgctc
gacgagtttgcgcggctcggccgcgcccaggttatagccggcgccttctcctatgtggcg
ggctatggcatccggcttttgccggtcatccagtcccgttcccagcttcgcgctgtctat
ggcgagcatgttgccgacgagatcgtcgccaattgcggcgtcgagatcgcgttcacgccc
aaggaactgcgggtcgccaacgagctgtcggaacggattggctatgtggggcaagagtca
gtgaccaaatccctcaccatccatggcattcttgccaatcgctcaaaatccatgtccgac
catcgccgcgcgctgttgctgccgcaggaactgatgcagttccccagtgacgagctactg
ttgctgcgcgggggcatgccgccgatccgggctgacaagatccgctattatggcgatcgc
catttcacgcgccggctggctccgccaccgagcgtcgcgcccatcgtccggcgcatcgcg
gaggatgaggacctgcctccctgcgttctgcccgacgccgaccagctggcgaaccctgac
cctgagaccttcgccatggattgtgtcgtgatctcggattttgacgacattttgatcgat
gtggaggcgagtgagcgcggcgaccgccgtgtgggcatcattgagcaggagcgataa

DBGET integrated database retrieval system