Uncultured Sphingopyxis sp. UC10: SPPYR_2754
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Entry
SPPYR_2754 CDS
T05531
Symbol
sucA
Name
(GenBank) 2-oxoglutarate decarboxylase, thiamin-requiring
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00020
Citrate cycle (TCA cycle)
sphu00785
Lipoic acid metabolism
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01120
Microbial metabolism in diverse environments
sphu01200
Carbon metabolism
sphu01210
2-Oxocarboxylic acid metabolism
Module
sphu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPPYR_2754 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SPPYR_2754 (sucA)
Enzymes [BR:
sphu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SPPYR_2754 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
Motif
Other DBs
NCBI-ProteinID:
SBV33874
UniProt:
A0A1Y5Q326
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All DBs
Position
SPPYR:complement(2904379..2907201)
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AA seq
940 aa
AA seq
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MNLERQSFDIDEPQAGPSWAPKNWPVIDSDDLTAALDPQQMQVAVKAAAAKAGAALSSAE
VERAADDSIRAMMLIRTYRVRGHLAATLDPLGLSQRELPADLTPEYHGFVGADQDRPVYI
GGTLGLEKATIREIVAILRANYCGHVGLEYMHISDVEERRFLQDRMEGADKSVEFTQEGK
RAILNKVIEAEEWEKFLARKYVGTKRFGLDGGESMIPAMESIIKYGGQYGVKEIVYGMAH
RGRLNMLANVMAKPYQVIFHEFAGGSANPDDIGGSGDVKYHLGTSTDREFDGVSVHMSLV
PNPSHLEAVDPVVLGKVRAQQVVRDDLAEHTQVLPVLIHGDAAFAGQGIVWECLGFSGIR
GYNTGGCIHFIVNNQIGFTTSPQFARSSPYPSDVAKGVQAPILHVNGDDPEAVTFACKLA
IDFRQQFKRDVVIDMWCYRRFGHNEGDEPSFTQPLMYERIRKHPPVSQLCAAKLQDEGVI
DAGWADARRAEFTARLEGDFEAAKTYKPNKADWFAGRWSGLYAPTDSEHARRNIATGVSE
KLFDSIGRTLTTIPADVEVHKTLRRVIDARGAMFANKDDGEVFDWATAESLAFGTLLSEG
YQVRLSGQDSGRGTFSQRHAVWVDQKSEEKYVPLTTVPHGRFEVLDSPLSEYGVLGFEYG
YAMADPKSLVLWEAQFGDFANGAQIMIDQFIAAGEAKWLRANGLVMLLPHGYEGQGPEHS
SARLERFLQLCAGDNIQVCNISTPSNYFHVLRRQMLRSFRKPLIIMTPKSLLRHKLAVSQ
RSDFIGDAHFRRIMSDRTPPADKDIKRVVLCSGKVGYDLMEARDAADLTDTTVIRIEQLY
PFPGEALAVRLKRMPKLEEVVWAQEEPRNNGAWFFVGELIEESLAEAGHKGMRPRYAGRA
AAASPATGLMSRHQTEQSALVADALGLSVRAEIRRAKSKA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgagagacaaagcttcgacatcgatgagccgcaggccggcccgagctgggcg
ccgaagaactggcccgtcatcgacagcgacgacctgaccgccgcgctcgacccgcagcag
atgcaggtcgcggtaaaggccgccgccgccaaggcgggggccgcgttgtcgagcgccgag
gtcgagcgcgccgccgacgattcgatccgcgcgatgatgctgatccgcacctatcgcgtg
cgcgggcaccttgccgccacgctcgatccgcttgggctcagccagcgcgaactgcccgcc
gacctgacgcccgaatatcacggcttcgtcggcgccgatcaggatcggccggtgtatatc
ggcggaacgctgggtctcgaaaaggcgacgatccgcgagatcgtcgcgatcctgcgcgcc
aattattgcggccatgtcggcctcgaatatatgcacatctccgacgtcgaggagcggcgc
ttcctgcaggaccggatggagggcgccgacaagagcgtcgaattcacccaggaaggcaag
cgcgcgatcctcaacaaggtgatcgaggccgaggaatgggagaaattcctcgcgcgcaaa
tatgtcggcaccaagcgtttcgggctcgacggcggcgaatcgatgatccccgcgatggaa
tcgatcatcaaatatggcggccaatatggcgtgaaggaaatcgtctatggcatggcgcac
cgcgggcggctcaatatgctcgcgaacgtcatggcgaagccctatcaggtgatctttcac
gaattcgccggcggcagcgccaaccccgacgacatcggcggttcgggcgacgtcaaatat
cacctcggcacctcgaccgaccgcgagttcgacggggtttcggtgcatatgtcgctcgtc
cccaacccctcgcacctcgaagcggtcgatcccgtcgtgctcggcaaggtgcgcgcgcag
caggtcgtgcgcgacgacctcgccgaacatacgcaggtgctgccggtgctgatccacggc
gacgcggcgttcgcggggcaggggatcgtctgggaatgcctcggcttctctgggatccgc
ggctacaataccggcggctgcatccacttcatcgtcaacaaccagatcggtttcacgacc
agcccgcagttcgcgcgctcgtcgccctatccgtcggacgtcgccaagggcgtccaggcg
ccgatcctgcacgtcaacggcgatgatccggaggcggtgacctttgcgtgcaagctcgcg
atcgacttccgccagcagttcaagcgcgacgtcgtgatcgacatgtggtgctatcgccgc
ttcggccataacgaaggcgacgaaccctcgttcacccagcctttgatgtacgaacgcatc
cgcaagcatccgccggtgtcgcagctttgcgccgcgaaactgcaggacgagggcgtgatc
gacgccggctgggccgacgcgcgccgcgccgaattcaccgcgcggctcgaaggcgatttc
gaggcggcgaagacctataaaccgaacaaggccgactggttcgccgggcgctggtcgggc
ctctatgcgccgaccgattccgaacatgcgcgccgcaacatcgcgacgggcgtttcggaa
aaattgttcgattcgatcggccgcacgctgacgacgatccccgccgatgtcgaggttcac
aagacgctgcgccgcgtcatcgacgcgcgcggcgcgatgttcgcgaacaaggacgacggc
gaagtgttcgactgggcgaccgccgagagcctcgccttcggcaccttgctcagcgaaggc
tatcaggtgcgcctgtcggggcaggattcgggccgcggcaccttcagccagcgccacgcc
gtctgggtcgaccagaagagcgaggaaaaatatgttccgctgacgaccgtgccgcacggc
cggttcgaggtgctcgacagcccgctctccgaatatggcgtgctcggcttcgaatatggc
tatgcgatggccgaccccaagagtctcgtgctctgggaagcgcagttcggtgacttcgcc
aacggcgcgcagatcatgatcgaccagttcatcgccgcgggcgaggccaagtggctgcgc
gccaacggcctcgtgatgctgctcccgcacggttatgaaggacaggggcccgagcatagc
tcggcgcgcctcgaacgcttccttcagctgtgcgcgggcgacaatatccaggtgtgcaat
atttcgaccccgtcgaactatttccacgtcctgcgccgccagatgctgcgctcgttccgc
aagccgctgatcatcatgacgcccaagtcgctgcttcgccacaagctggcggtgtcgcag
cggtcggacttcatcggcgacgcgcatttccgccgcatcatgtccgaccgcacgccgccc
gccgacaaggacatcaagcgcgtcgtgctctgttcgggcaaggtcggttacgatctgatg
gaagcgcgcgacgccgcggatctcaccgacacgacggtgatccgcatcgagcagctctat
cccttcccgggcgaggcgctcgcggttcgcctgaagcggatgccgaagctcgaagaggtc
gtctgggcgcaggaagagccgcgcaacaacggcgcctggttcttcgtgggcgagctgatc
gaggaatcgctggccgaagcgggccataagggcatgcgcccgcgttacgccggccgcgcc
gccgcggcatcgcccgcgacgggcctgatgagccgtcaccagaccgaacagtcggcgctc
gtcgccgatgccctgggtttgtcggttagagcggaaatcaggcgcgcgaagagcaaggca
tag
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